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Submitted SNP(ss) Details: ss13438508           
Submitter
HandleSC_SNP
Submitter SNP IDNT_004487.15_11280475
RefSNP(rs#)rs2439865
Submitted Batch IDCHRX_NA17119.2
Submitted DateOct 23, 2003
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPOct 23 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHRX_NA17119
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:XSNP51152-378j22.p1kposition:315quality:56

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss13438508|allelePos=2000|len=2729|taxid=9606|alleles='T/C'|mol=Genomic
 ACCCAGTAtt tcccgtctct atctcctgtc catatcatct gtatgggtga agttaatttc
 ttgcaggtag catatagttg ggtcttcttt atccatttag ccaccctaca ccttttaatt
 gcaggattga gctcatttac attcagtgtt atcaataagt aaggacttac tactgccatt
 ttgttgctta ttatctggtt gttttataac tcctttcttt tttcctactg tctttctttg
 tggtgaagtg attttctctt gtagtatgtt ttaatttgtt gcatttcatt tttagtgaat
 gtattataga tttttgcatt gtggttacca taagccttac aaaaaacatc ttatagatac
 gttattttat aaagaagtta atctatctta gatcataaag aataaaaagg aaaatatttt
 taaaaaattt ttacacttta actccacccc tcccacagtt tgacttcagt tatcttaatt
 tacgtattac taatgtttta acagtttctg tagctgttat catttttgat agctttgtct
 tttaggcttc atactaagtt atgagtgggt tgaacaccat aattatagta ttagagtatt
 ctgggtttgt ctgtgtactt aattttatca gtgggtttca taccttcaaa tgttttttca
 tttgtttgct taagttatat tttttcatgt tagtgttttt ttctttcaga tcaaagagtt
 ccctttagtg cttcttgtaa aatgagtcta gtgttggtga attctctcag cttttgtttc
 tctagggaag actttacgtc tcctttatat ttgaaagata acttttctgg atacaatatt
 cttgcatggc agtgtttttc tttcagcact ttgaaaatgt tgctcaactc cctgctgttc
 tgtatgattt ctattgagaa gtctgttact agatgaactg gaggtccttt atatgctatt
 agcctctttt ctatttctgt tttttttttt gtatttttct ctctgtcctt gacttttggg
 tgtttgatta ttatagtcct tggggtagtc ttatttgggt caaatctgtt tggtgttctc
 tgaccttcct gtacctggat acttatctct ttctcaagtt ttggaaagtt ttcaattatt
 attttttttt aaataaatct tctatccctt gctcttgctc gacttcctct caaacaccag
 taatttgatt ttctcttttg agatcacttt ctatatcttg taggcaacct ttgttgattt
 ttatattttt tcttcttttt tcttctctgt gtattttaaa atagactgtc ttcaagctca
 ctggttcttt cctctccttg atccattttg ctgttgagag cctctaatga atttttaagt
 tcagcaaatg tatttctaag ttccaagatt tctgtttaat ttcttttatt atttcaactt
 gtttgttaaa tttcttcaat ggctttccga attgtttttc tgtgttatct tggagatcac
 tgagttttct taaaactact attttgaatt cttggtcaga gagctcacat atcaccatct
 ccttagtgtt attttcaggt tccttgtttt gatccatttg ggaagattgt ggttctctgt
 ttgctcttgt ttcttgtggg tctacgtatg tgtctttgca ttaaagagtt atttattcca
 gtcttctctg tctggcttgt ttTGTTTTAT ATTGAATATA TTTGCTTAGA GGttttttgt
 tgtttgtttg ttttgagaca gagttttgct ctgtcaccca gactagaatg cagtggtaca
 aacatggctc actgcagcct caacttcctg ggctcaagtg atcctcctgc ctctgcctcc
 caagtagctg ggactacagg caagcaccac tatacccagc taattttttt aatagagatg
 atgtctcacc atgttgccca agctggtctA ctaggtcaca gcctcctttt cagctctagg
 aggtacctaa acctcagaa
 Y
 tgcctcagtt ctagtaaagg attggagcac tgctcttccc aaacggaggg gatctcaaag
 ggaatatcct ggcagtgtgg gaaggctagc taggggtttg tgcctatggg acctgtggga
 caaacctcct acagtgtgat gttgctgaac aatcactctg atttgacgtc tcctttggct
 gatctataga gcagagtttc cagaactggg gatggtagcc ccacttaccc gctttgcctc
 tcctcaggaa caaatttccc ttcaggcact ctgaattctt cccatgaaga tgcttcccct
 gccagaaaac ccaagatggt ggagaagctg cttttaaacc tcaatctcac tttttgcatt
 gtagaaacag caagttgggg gaaaactttc catgcactgt tgctgggcat aatgcgggga
 ggggtatctc agatgtggaa atccaattat cttaccatct gctcagagtt ttttcacttc
 tctgcatctc tgggaactgt ctcatattat atttgagttc caggatattt ctggcaaaaa
 tctcagcatt gtacatttgt ttttgttttt ctagggtgtg gtgggtggga agtgaagcca
 gcatccttcc atgctgccat tttggtacTC TATGTTACTA CTTTTTATTT GTCCCTTCTG
 TTCTATATTT CTTTTTCTTT CCTTTTAGTT TTCTTTTAGA TTAAAATGGG GGGGGGTAGG
 TCAGTAATT

  Submitted Frequency for ss13438508 back to top
There is no frequency submission for ss13438508.


  dbSNP summary of Genotypes for ss13438508 back to top
No sufficient data to compute Hardy-weinberg probability for ss13438508.


  Submitted individual genotype for ss13438508 back to top
There is no individual genotype data for ss13438508.

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