Submitter | Handle | SC_SNP | Submitter SNP ID | NT_004487.15_11280475 | RefSNP(rs#) | rs2439865 | Submitted Batch ID | CHRX_NA17119.2 | Submitted Date | Oct 23, 2003 | Publication Cited | [1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP [2] SSAHA: A Fast Search Method for Large DNA Databases | First entry to dbSNP | Oct 23 2003 12:00:00:000AM |
| Resource Links | GenBank Accession | NT_004487
| Submitted Gene Name | N.D | Submitted Gene ID | N.D. | Submitted SNP Synonyms | N.D | Submitted linkout | N.D |
| Assay | Species | Homo sapiens | Molecular Type | Genomic | Method | CHRX_NA17119 | Ascertainment Samplesize | 2 | Population | N.D. |
| Allele | Observed Allele | T/C | Ancestral Allele | N.D. | Allele Origin | N/A | SNP Class | SNV | CpG Code | Unknown |
| | Variation | Frequency Submission | N.D. | Genotype Summary | N.D. | Genotype Submission | N.D. | Haplotype | N.D. |
|
Comment | sequence:XSNP51152-378j22.p1kposition:315quality:56 |
>gnl|dbSNP|ss13438508|allelePos=2000|len=2729|taxid=9606|alleles='T/C'|mol=Genomic ACCCAGTAtt tcccgtctct atctcctgtc catatcatct gtatgggtga agttaatttc
ttgcaggtag catatagttg ggtcttcttt atccatttag ccaccctaca ccttttaatt
gcaggattga gctcatttac attcagtgtt atcaataagt aaggacttac tactgccatt
ttgttgctta ttatctggtt gttttataac tcctttcttt tttcctactg tctttctttg
tggtgaagtg attttctctt gtagtatgtt ttaatttgtt gcatttcatt tttagtgaat
gtattataga tttttgcatt gtggttacca taagccttac aaaaaacatc ttatagatac
gttattttat aaagaagtta atctatctta gatcataaag aataaaaagg aaaatatttt
taaaaaattt ttacacttta actccacccc tcccacagtt tgacttcagt tatcttaatt
tacgtattac taatgtttta acagtttctg tagctgttat catttttgat agctttgtct
tttaggcttc atactaagtt atgagtgggt tgaacaccat aattatagta ttagagtatt
ctgggtttgt ctgtgtactt aattttatca gtgggtttca taccttcaaa tgttttttca
tttgtttgct taagttatat tttttcatgt tagtgttttt ttctttcaga tcaaagagtt
ccctttagtg cttcttgtaa aatgagtcta gtgttggtga attctctcag cttttgtttc
tctagggaag actttacgtc tcctttatat ttgaaagata acttttctgg atacaatatt
cttgcatggc agtgtttttc tttcagcact ttgaaaatgt tgctcaactc cctgctgttc
tgtatgattt ctattgagaa gtctgttact agatgaactg gaggtccttt atatgctatt
agcctctttt ctatttctgt tttttttttt gtatttttct ctctgtcctt gacttttggg
tgtttgatta ttatagtcct tggggtagtc ttatttgggt caaatctgtt tggtgttctc
tgaccttcct gtacctggat acttatctct ttctcaagtt ttggaaagtt ttcaattatt
attttttttt aaataaatct tctatccctt gctcttgctc gacttcctct caaacaccag
taatttgatt ttctcttttg agatcacttt ctatatcttg taggcaacct ttgttgattt
ttatattttt tcttcttttt tcttctctgt gtattttaaa atagactgtc ttcaagctca
ctggttcttt cctctccttg atccattttg ctgttgagag cctctaatga atttttaagt
tcagcaaatg tatttctaag ttccaagatt tctgtttaat ttcttttatt atttcaactt
gtttgttaaa tttcttcaat ggctttccga attgtttttc tgtgttatct tggagatcac
tgagttttct taaaactact attttgaatt cttggtcaga gagctcacat atcaccatct
ccttagtgtt attttcaggt tccttgtttt gatccatttg ggaagattgt ggttctctgt
ttgctcttgt ttcttgtggg tctacgtatg tgtctttgca ttaaagagtt atttattcca
gtcttctctg tctggcttgt ttTGTTTTAT ATTGAATATA TTTGCTTAGA GGttttttgt
tgtttgtttg ttttgagaca gagttttgct ctgtcaccca gactagaatg cagtggtaca
aacatggctc actgcagcct caacttcctg ggctcaagtg atcctcctgc ctctgcctcc
caagtagctg ggactacagg caagcaccac tatacccagc taattttttt aatagagatg
atgtctcacc atgttgccca agctggtctA ctaggtcaca gcctcctttt cagctctagg
aggtacctaa acctcagaa
Y
tgcctcagtt ctagtaaagg attggagcac tgctcttccc aaacggaggg gatctcaaag
ggaatatcct ggcagtgtgg gaaggctagc taggggtttg tgcctatggg acctgtggga
caaacctcct acagtgtgat gttgctgaac aatcactctg atttgacgtc tcctttggct
gatctataga gcagagtttc cagaactggg gatggtagcc ccacttaccc gctttgcctc
tcctcaggaa caaatttccc ttcaggcact ctgaattctt cccatgaaga tgcttcccct
gccagaaaac ccaagatggt ggagaagctg cttttaaacc tcaatctcac tttttgcatt
gtagaaacag caagttgggg gaaaactttc catgcactgt tgctgggcat aatgcgggga
ggggtatctc agatgtggaa atccaattat cttaccatct gctcagagtt ttttcacttc
tctgcatctc tgggaactgt ctcatattat atttgagttc caggatattt ctggcaaaaa
tctcagcatt gtacatttgt ttttgttttt ctagggtgtg gtgggtggga agtgaagcca
gcatccttcc atgctgccat tttggtacTC TATGTTACTA CTTTTTATTT GTCCCTTCTG
TTCTATATTT CTTTTTCTTT CCTTTTAGTT TTCTTTTAGA TTAAAATGGG GGGGGGTAGG
TCAGTAATT
There is no frequency submission for ss13438508.
No sufficient data to compute Hardy-weinberg probability for ss13438508.
There is no individual genotype data for ss13438508.
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