Submitted SNP(ss) Details: ss14872979

Submitted SNP(ss) Details: ss14872979

Submitter
Handle	PERLEGEN
Submitter SNP ID	PS00487709
RefSNP(rs#)	rs10486494
Submitted Batch ID	08-28-2003
Submitted Date	Nov 24, 2003
Publication Cited	11721056
First entry to dbSNP	Nov 13 2003 12:00:00:000AM

Resource Links
GenBank Accession	NC_000007.7
Submitted Gene Name	N.D
Submitted Gene ID	N.D.
Submitted SNP Synonyms	N.D
Submitted linkout	N.D

Assay
Species	Homo sapiens
Molecular Type	Genomic
Method	WAFER_HYB
Ascertainment Samplesize	17
Population	NCBI\|NIHPDR

Allele
Observed Allele	T/C
Ancestral Allele	N.D.
Allele Origin	N/A
SNP Class	SNV
CpG Code	Unknown

Validation
Validation Status
HWE Goodness of Fit	not applicable

Variation
Frequency Submission	N.D.
Genotype Summary	population count: 5
Genotype Submission	N.D.
Haplotype	N.D.

Comment
position 26969047

Fasta sequence (Legend)

 GGTATACTTT ATTGAAATAC TATGTACAAA AAGTGCAAAA GTCATAAGAT CATCTAACAC
 CAACAAATAT TTATTTTCAT TCAACAAATA AATGATTCTG
 Y
 AAAACTTATT GGCAATGTGT GAGAGTATTG CACACTGCAA TAAAGTGTTG TCAGTAAGAG
 GCCTCTTCTC TACATTACCT GCTGTTGATC TGGGATGAAT

Submitted Frequency for ss14872979

There is no frequency submission for ss14872979.

dbSNP summary of Genotypes for ss14872979

Population ID -Class	Total Sample (2N)	Founder (2N)	Major Allele Freq.	Minor Allele Freq.	Genotype Freq.	HWE Goodness of Fit	Data Source
Caucasian	24	24	T=0.91666669	C=0.08333334	T/T=0.83333331 C/T=0.16666667	Pr(chiSq=0.016,df=1) =1.000	Genotype Freq.
PDpanel	44	44	T=0.84090906	C=0.15909091	T/T=0.68181819 C/T=0.31818181	Pr(chiSq=0.231,df=1) =0.655	Genotype Freq.

Submitted individual genotype for ss14872979

There is no individual genotype data for ss14872979.

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