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Submitted SNP(ss) Details: ss14873596           
Submitter
HandlePERLEGEN
Submitter SNP IDPS00512548
RefSNP(rs#)rs10487111
Submitted Batch ID08-28-2003
Submitted DateNov 24, 2003
Publication Cited11721056
First entry to dbSNPNov 13 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodWAFER_HYB
Ascertainment Samplesize19
PopulationNCBI|NIHPDR
Allele
Observed AlleleC/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusbyFreq
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 5
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
position 89534115

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss14873596|allelePos=101|len=201|taxid=9606|alleles='C/A'|mol=Genomic
 GGGTCCTAGT AATCCCCATG TTCATTCTCC TAAAAGTTCA TCTTGACCTA GCCTTCAATA
 TAGGGCTTTA GGGAGGAAAG TAACGATAGT TCAGAAAGAT
 M
 AGAATAAATC AGCAGTTTCT GCAGCTGTGA AATCAAGGTA ACTATAAACT AGAGGGCAGT
 GATGATGGTG ATGATGGCAG GGAACTAGGC ATAGGAGAGC

  Submitted Frequency for ss14873596 back to top
There is no frequency submission for ss14873596.


  dbSNP summary of Genotypes for ss14873596 back to top

Population ID
 -Class
Total
Sample
(2N)
Founder
(2N)
Major
Allele
Freq.
Minor
Allele
Freq.
Genotype
Freq.
HWE Goodness of FitData
Source
Caucasian2020C=0.75000000
A=0.25000000C/C=0.50000000
A/C=0.50000000
Pr(chiSq=0.486,df=1)
=0.527
Genotype
Freq.
PDpanel4242C=0.54761904
A=0.45238096A/C=0.61904764
C/C=0.23809524
A/A=0.14285715
Pr(chiSq=1.306,df=1)
=0.254
Genotype
Freq.

  Submitted individual genotype for ss14873596 back to top
There is no individual genotype data for ss14873596.

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