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Submitted SNP(ss) Details: ss14873957           
Submitter
HandlePERLEGEN
Submitter SNP IDPS00528586
RefSNP(rs#)rs10487472
Submitted Batch ID08-28-2003
Submitted DateNov 24, 2003
Publication Cited11721056
First entry to dbSNPNov 13 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodWAFER_HYB
Ascertainment Samplesize23
PopulationNCBI|NIHPDR
Allele
Observed AlleleG/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG Codec_g/a
Validation
Validation StatusbyFreq
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 5
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
position 126406724

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss14873957|allelePos=101|len=201|taxid=9606|alleles='G/A'|mol=Genomic
 TTTGTACCTC CTAGAAGAAT GCTTCTAAAA ACTTTCATTA CACTTGTTGA TAATGTTTAC
 ACTTTAAAAA ATACATATAT CTGGGAAGGT ATTTGTACAC
 R
 TCATTCATTA TTCCAAATAT AAGGGTATTT GTACATTACA TGTCATTCAT TATTTCAAAT
 GTAATTTTAA TCAGATCAAC ATAAAAGCAT CTTAATATAA

  Submitted Frequency for ss14873957 back to top
There is no frequency submission for ss14873957.


  dbSNP summary of Genotypes for ss14873957 back to top

Population ID
 -Class
Total
Sample
(2N)
Founder
(2N)
Major
Allele
Freq.
Minor
Allele
Freq.
Genotype
Freq.
HWE Goodness of FitData
Source
Caucasian2424G=0.91666669
A=0.08333334G/G=0.83333331
A/G=0.16666667
Pr(chiSq=0.016,df=1)
=1.000
Genotype
Freq.
PDpanel4848G=0.97916669
A=0.02083333G/G=0.95833331
A/G=0.04166667
Pr(chiSq=0.000,df=1)
=1.000
Genotype
Freq.

  Submitted individual genotype for ss14873957 back to top
There is no individual genotype data for ss14873957.

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