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Submitted SNP(ss) Details: ss162980598           
Submitter
HandleCOMPLETE_GENOMICS
Submitter SNP IDNA19240_36_chr1_554869
RefSNP(rs#)rs1856864
Submitted Batch IDNA19240_snpassay_chr1
Submitted DateSep 29, 2009
Publication Cited[1] Human Genome Sequencing Using Unchained Base Reads on Self-assembling DNA Nanoarrays
First entry to dbSNPSep 29 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodCOMPLETE GENOMICS SEQUENCING
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss162980598|allelePos=251|len=501|taxid=9606|alleles='C/T'|mol=Genomic
 ACTTATATGA TATGTCTCCA TACCCATTAC AATCTCCAGC ATTCCCCCTC AAACCTAAGA
 AATATGTCTG ATAAAAGAGT TACTTTGATA GAGTAAATAA TAGGAGTTTA AATCCCCTTA
 TTTCTAGGAC TATGAGAATC GAACCCATCC CTGAGAATCC AAAATTCTCC GTGCCACCTA
 TCACACCCCA TCCTAAAGTA AGGTCAGCTA AATAAGCTAT CGGGCCCATA CCCCGAAAAT
 GTTGGTTATA
 Y
 CCTTCCCGTA CTAATTAATC CCCTGGCCCA ACCCGTCATC TACTCTACCA TCTTTGCAGG
 CACACTCATC ACAGCGCTAA GCTCGCACTG ATTTTTTACC TGAGTAGGCC TAGAAATAAA
 CATGCTAGCT TTTATTCCAG TTCTAACCAA AAAAATAAAC CCTCGTTCCA CAGAAGCTGC
 CATCAAGTAT TTCCTCACGC AAGCAACCGC ATCCATAATC CTTCTAATAG CTATCCTCTT
 CAACAATATA

  Submitted Frequency for ss162980598 back to top
There is no frequency submission for ss162980598.


  dbSNP summary of Genotypes for ss162980598 back to top
No sufficient data to compute Hardy-weinberg probability for ss162980598.


  Submitted individual genotype for ss162980598 back to top
There is no individual genotype data for ss162980598.

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