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Submitted SNP(ss) Details: ss162980619           
Submitter
HandleCOMPLETE_GENOMICS
Submitter SNP IDNA19240_36_chr1_555404
RefSNP(rs#)rs6594031
Submitted Batch IDNA19240_snpassay_chr1
Submitted DateSep 29, 2009
Publication Cited[1] Human Genome Sequencing Using Unchained Base Reads on Self-assembling DNA Nanoarrays
First entry to dbSNPSep 29 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodCOMPLETE GENOMICS SEQUENCING
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss162980619|allelePos=251|len=501|taxid=9606|alleles='A/G'|mol=Genomic
 ATCAATACTC ATCATTAATA ATCATAATGG CTATAGCAAT AAAACTAGGA ATAGCCCCCT
 TTCACTTCTG AGTCCCAGAG GTTACCCAAG GCACCCCTCT GACATCCGGC CTGCTCCTTC
 TCACATGACA AAAACTAGCC CCCATCTCAA TCATATACCA AATTTCTCCC TCATTAAACG
 TAAGCCTTCT CCTCACTCTT TCAATCTTAT CCATCATGGC AGGCAGTTGA GGTGGATTAA
 ACCAAACCCA
 R
 CTACGCAAAA TCTTAGCATA CTCCTCAATT ACCCACATAG GATGAATAAC AGCAGTTCTA
 CCGTACAACC CTAACATAAC CATTCTTAAT TTAACTATTT ATATTATCCT AACTACTACC
 GCATTCCTAC TACTCAACTT AAACTCCAGC ACCACAACCC TACTACTATC TCGCACCTGA
 AACAAGCTAA CATGACTAAC ACCCTTAATT CCATCCACCC TCCTCTCCCT AGGAGGCCTG
 CCCCCGCTAA

  Submitted Frequency for ss162980619 back to top
There is no frequency submission for ss162980619.


  dbSNP summary of Genotypes for ss162980619 back to top
No sufficient data to compute Hardy-weinberg probability for ss162980619.


  Submitted individual genotype for ss162980619 back to top
There is no individual genotype data for ss162980619.

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