Submitted SNP(ss) Details: ss16333712

Submitted SNP(ss) Details: ss16333712

Submitter
Handle	PERLEGEN
Submitter SNP ID	PS00652587
RefSNP(rs#)	rs3888820
Submitted Batch ID	11-25-2003
Submitted Date	Nov 25, 2003
Publication Cited	11721056
First entry to dbSNP	Nov 25 2003 12:00:00:000AM

Resource Links
Submitted Gene Name	N.D
Submitted Gene ID	N.D.
Submitted SNP Synonyms	N.D
Submitted linkout	N.D

Assay
Species	Homo sapiens
Molecular Type	Genomic
Method	WAFER_HYB
Ascertainment Samplesize	20
Population	NCBI\|NIHPDR

Allele
Observed Allele	A/G
Ancestral Allele	N.D.
Allele Origin	N/A
SNP Class	SNV
CpG Code	Unknown

Validation
Validation Status
HWE Goodness of Fit	not applicable

Variation
Frequency Submission	N.D.
Genotype Summary	population count: 5
Genotype Submission	N.D.
Haplotype	N.D.

Fasta sequence (Legend)

 CTCAGGTGAT CCACCCACCT CGGCCTCCCA AAGTGCTGGG ATTACAGTCA TGAGGCACCG
 CACGTGGGCT CAAGCTGGGA GGAATCTTGG TGAGCATCCA
 R
 TTCAGCCTTC CCGTGGCCAC TCCTCCCACA GACAGGCAAA CGGAGGCCTG GGGGTTTCAG
 TGGGCCTTGT ATTAGCAACA TAAGGAAAAT GCACATTTAT

Submitted Frequency for ss16333712

There is no frequency submission for ss16333712.

dbSNP summary of Genotypes for ss16333712

Population ID -Class	Total Sample (2N)	Founder (2N)	Major Allele Freq.	Minor Allele Freq.	Genotype Freq.	HWE Goodness of Fit	Data Source
Caucasian	22	22	G=0.54545456	A=0.45454547	A/G=0.72727275 G/G=0.18181819 A/A=0.09090909	Pr(chiSq=2.396,df=1) =0.150	Genotype Freq.
PDpanel	46	46	G=0.82608694	A=0.17391305	G/G=0.65217394 A/G=0.34782609	Pr(chiSq=0.324,df=1) =0.584	Genotype Freq.

Submitted individual genotype for ss16333712

There is no individual genotype data for ss16333712.

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