Submitted SNP(ss) Details: ss16333722

Submitted SNP(ss) Details: ss16333722

Submitter
Handle	PERLEGEN
Submitter SNP ID	PS00654524
RefSNP(rs#)	rs1292081
Submitted Batch ID	11-25-2003
Submitted Date	Nov 25, 2003
Publication Cited	11721056
First entry to dbSNP	Nov 25 2003 12:00:00:000AM

Resource Links
Submitted Gene Name	N.D
Submitted Gene ID	N.D.
Submitted SNP Synonyms	N.D
Submitted linkout	N.D

Assay
Species	Homo sapiens
Molecular Type	Genomic
Method	WAFER_HYB
Ascertainment Samplesize	20
Population	NCBI\|NIHPDR

Allele
Observed Allele	T/C
Ancestral Allele	N.D.
Allele Origin	N/A
SNP Class	SNV
CpG Code	c/t_g

Validation
Validation Status
HWE Goodness of Fit	not applicable

Variation
Frequency Submission	N.D.
Genotype Summary	population count: 5
Genotype Submission	N.D.
Haplotype	N.D.

Fasta sequence (Legend)

 GCCCTGCTTT GTGTTTGGCA AAGCACCACC CCCTGGGATA CTCCCTTATG TGAGAGTGAG
 CGTAGGCAGA GCCTAGCAAT CTGTCTATAA AGTGGCTGCA
 Y
 GGATGAGGGA CATTATTATG GGTTCTACAG CTGAAGGGAA CTGGGTTCCA AGCCCAACTC
 TGCTGTGTTA CCTTAGGTAA GTCACTTTCC CTCTCTGAGC

Submitted Frequency for ss16333722

There is no frequency submission for ss16333722.

dbSNP summary of Genotypes for ss16333722

Population ID -Class	Total Sample (2N)	Founder (2N)	Major Allele Freq.	Minor Allele Freq.	Genotype Freq.	HWE Goodness of Fit	Data Source
Caucasian	24	24	T=0.87500000	C=0.12500000	T/T=0.75000000 C/T=0.25000000	Pr(chiSq=0.057,df=1) =1.000	Genotype Freq.
PDpanel	48	48	T=0.83333331	C=0.16666667	T/T=0.70833331 C/T=0.25000000 C/C=0.04166667	Pr(chiSq=0.240,df=1) =0.655	Genotype Freq.

Submitted individual genotype for ss16333722

There is no individual genotype data for ss16333722.

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