Submitted SNP(ss) Details: ss16333723

Submitted SNP(ss) Details: ss16333723

Submitter
Handle	PERLEGEN
Submitter SNP ID	PS01000789
RefSNP(rs#)	rs1292080
Submitted Batch ID	11-25-2003
Submitted Date	Nov 25, 2003
Publication Cited	11721056
First entry to dbSNP	Nov 25 2003 12:00:00:000AM

Resource Links
Submitted Gene Name	N.D
Submitted Gene ID	N.D.
Submitted SNP Synonyms	N.D
Submitted linkout	N.D

Assay
Species	Homo sapiens
Molecular Type	Genomic
Method	WAFER_HYB
Ascertainment Samplesize	20
Population	NCBI\|NIHPDR

Allele
Observed Allele	G/C
Ancestral Allele	N.D.
Allele Origin	N/A
SNP Class	SNV
CpG Code	Unknown

Validation
Validation Status
HWE Goodness of Fit	not applicable

Variation
Frequency Submission	N.D.
Genotype Summary	population count: 5
Genotype Submission	N.D.
Haplotype	N.D.

Fasta sequence (Legend)

 GGAGTGCAGT GAGGAAGCCA GTGGGGTCAT CACACAGCCC CCTCCCACCA GGAGTGCTGA
 CGCATCCCTA CACTGACGTC CAGGAGCCAT CTGAGGCCTA
 S
 GAGGACATGA GAACAAGCAG GGACCAGAGT GAGGACCACC GTAGTGCACT CTGGGGAGGC
 CGTGGAGTCC ATCCTTCCCT CAGGGCAGGA CAGGGCATTA

Submitted Frequency for ss16333723

There is no frequency submission for ss16333723.

dbSNP summary of Genotypes for ss16333723

Population ID -Class	Total Sample (2N)	Founder (2N)	Major Allele Freq.	Minor Allele Freq.	Genotype Freq.	HWE Goodness of Fit	Data Source
Caucasian	24	24	C=0.95833331	G=0.04166667	C/C=0.91666669 C/G=0.08333334	Pr(chiSq=0.002,df=1) =1.000	Genotype Freq.
PDpanel	42	42	C=0.90476191	G=0.09523810	C/C=0.80952382 C/G=0.19047619	Pr(chiSq=0.042,df=1) =1.000	Genotype Freq.

Submitted individual genotype for ss16333723

There is no individual genotype data for ss16333723.

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