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Submitted SNP(ss) Details: ss16384092           
Submitter
HandleCSHL-HAPMAP
Submitter SNP IDCSHL-HuAA-200402.chr1.NT_021937.16_6756447
RefSNP(rs#)rs4846124
Submitted Batch IDCSHL-HuAA-200402
Submitted DateFeb 17, 2004
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 17 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCSHL-HUAA-200402
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityHuAA505s19600401466182.R -461 48HuAA505s19600402633145.R -218 62

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss16384092|allelePos=232|len=528|taxid=9606|alleles='C/T'|mol=Genomic
 CACTCTCTAG AATGTAGGCT CTCCAAGGAA TTTCCAGGCC TGGCTTGGTA ATTGGGTGCC
 CAGTGACTGT GTGAATGAAT GAATGAAATA GTTTTGCCTC TTCTGTGAAA CATTAGTAAC
 TTCCCTTTGA GGGGAACTTG GGAGGAATGA AGTTGACAAC CTGTGTGCTA TGGCTGTCGT
 TAGGACCAGC CACATCATTC gcagggtccc tggttcaaaa attgtaaaga a
 Y
 tgcaagatgg tgacagccga gcctcaaacc aagtgtaggg cgcttctgag agcagggcca
 gtgagaatcc ctgggtcaca cccaggaagc cagcccCAGC CATCGCACAG AGGGTGCCCA
 ACAGGAACAC CCAGTGGGAC CTCGTGCCAA GTCACAAGCC TTCCACGCTC CCCCAGGCAG
 CAGGAAACAC AAACACAGCT CTGGCAGAGC CACTCCAGGG AGAACGTATC ACACATCCCC
 AGCAGACAGG TGACACCTGC CAAACTAAAA GTTGCCTGCA CATCCAGTCT CTACAT

  Submitted Frequency for ss16384092 back to top
There is no frequency submission for ss16384092.


  dbSNP summary of Genotypes for ss16384092 back to top
No sufficient data to compute Hardy-weinberg probability for ss16384092.


  Submitted individual genotype for ss16384092 back to top
There is no individual genotype data for ss16384092.

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