| Submitter | | Handle | CSHL-HAPMAP | | Submitter SNP ID | CSHL-HuAA-200402.chr1.NT_021877.16_10797525 | | RefSNP(rs#) | rs6422639 | | Submitted Batch ID | CSHL-HuAA-200402 | | Submitted Date | Feb 17, 2004 | | Publication Cited | [1] SSAHA: A Fast Search Method for Large DNA Databases | | First entry to dbSNP | Feb 17 2004 12:00:00:000AM |
| | Resource Links | | GenBank Accession | NT_021877
| | Submitted Gene Name | N.D | | Submitted Gene ID | N.D. | | Submitted SNP Synonyms | N.D | | Submitted linkout | N.D |
| | Assay | | Species | Homo sapiens | Molecular
Type | Genomic | | Method | CSHL-HUAA-200402 | | Ascertainment Samplesize | 2 | | Population | N.D. |
| | Allele | | Observed Allele | A/G | | Ancestral Allele | N.D. | | Allele Origin | N/A | | SNP Class | SNV | | CpG Code | Unknown |
| | | Variation | | Frequency Submission | N.D. | | Genotype Summary | N.D. | | Genotype Submission | N.D. | | Haplotype | N.D. |
|
| Comment | | sequence position qualityHuAA506s19600403024354.F 559 43 |
>gnl|dbSNP|ss16384109|allelePos=501|len=1001|taxid=9606|alleles='A/G'|mol=Genomic GATCTTGACT TCAATATTCT ATACATTGGC TACCTATAAT TGTGAGTAAA CTAGgccagg
catggtggct catgcctgta atcccagcac tttgggaggc tgaggcaggt ggattggttt
gagctccaga gttcaagacc agcctgcaga ggtgggtgga ttggttcaag ctccagagtt
caagaccagc ctggccaaag tggcaaaccc catctctata aaaaatacaa aaattagcca
ggtgtggtag tgcacacttg tggtcctagc tactcgggag gctaaggctg gagaatcact
tgaacctggg aggtggaggt tgcagtgagc caagatcacg tcactgcact caagcctggg
tgacagaatg agacactgtc tcaaaaaaaa agaaagagaa agaaagaaag aaagaaagaa
ggaaagaaag aaagaaagaa agaaagaaag aaagaaagaa agaGAATCTA AAAACAAATT
AACTATAAAA AAATTTTTGA
R
TAAACCTTTT TATATTTTAC TTTTCGTTCT GTCATAGAAA GTCTCCAATA GCCTTTGTTC
Agtattattt ggcactcttg gttacacgtg acagaaactt aactcagact agcttaaaca
taagataaat atgttggctc cagtaactga aaagtccCTG CATGGTGGGA TTCCAATGCC
CAAAATGTAT TGTCAGGGCT CTGTTTGTTT TCATCTCTCA GTTTTGCTTT TAGCTCTTGG
CTACATTCCC AGGCTGGCTC TTTCTATGAG ACATAAAGAA AGCTACCAAG AGCTTCAGTT
TTATACAGTC TTTTTACCTC ACaatctcct gatggccttc ttgggtcaca tgaccttcca
tgaatcaaat atcatagcta aggagatgaa atactctgcc tgggcctggg ttataagccc
acccttggga cctggagcaa gggcagAGCA ATATCACACC TAAGTTATGC TGAGTGAACT
GGGTAATTGC AACATAGGGG
There is no frequency submission for ss16384109.
No sufficient data to compute Hardy-weinberg probability for ss16384109.
There is no individual genotype data for ss16384109.
| 
