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Submitted SNP(ss) Details: ss17324202           
Submitter
HandleCSHL-HAPMAP
Submitter SNP IDCSHL-HuCC-200402.chr1.NT_004668.16_7075398
RefSNP(rs#)rs10918935
Submitted Batch IDCSHL-HuCC-200402
Submitted DateFeb 19, 2004
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 19 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCSHL-HUCC-200402
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityHuCC101b19000132427696.R 443 37HuCC21b19000130979956.F 207 52

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss17324202|allelePos=324|len=728|taxid=9606|alleles='C/T'|mol=Genomic
 AATTTCTGGT AGGGGCTTAA AGCTCTAGCA GAAATTGCTA TCCATCTGCA TAGTATGTGG
 TCCTGGCCAG AAGAGCAATC CTCTTGCTCA TCTCATTATC CAAGACCTAG TTCATGCCTC
 ACATACTCCA CGAGTCCTCT CCTTTTAACT CAGGAGCCCA TTTTTCTCTT TTCCCTTTAA
 GATCCTGTAG CACTGGGCCG ggcttatgcc tgtaatccta gcactttggg aggccgaggt
 gggtggatag cctgaggtca ggagttcaag accagcctgg ccaacatggt gaaatgcttc
 tctactaaaa atacaaaaat tag
 Y
 caggcctggt ggcgggcgcc tgtaatccca gctacttggg aggctgaggc aagagaattg
 cttgaacccg ggaggcagag gttgcagtga gccaagatcg tgccacttca ctccagcctg
 gacaaaagag caaaactctg tctcGataaa taaataaata aataataaat aaataaataa
 taaataaata aaaataaaaa taaaAAGATC CTGTAGCACT CATCTAGCAC TTGTTATGAA
 GGAACTGTCT TGTTGTTGAG CTTTCCATGA ATGCTTGCAG GGCATTTTAG GGATGGGCTT
 CATCACCTTT ACAGTCTAAT GAGTATCCAT ATGCCTTCCT CCTATAAATT AGTACTCCAT
 CTTGAAGCTG AAAAGTCCAC ATGCTCATGT AGAGAGGCAA AGAA

  Submitted Frequency for ss17324202 back to top
There is no frequency submission for ss17324202.


  dbSNP summary of Genotypes for ss17324202 back to top
No sufficient data to compute Hardy-weinberg probability for ss17324202.


  Submitted individual genotype for ss17324202 back to top
There is no individual genotype data for ss17324202.

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