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Submitted SNP(ss) Details: ss18052648           
Submitter
HandleSC_SNP
Submitter SNP IDSC-CHRX_NA10470-200402.chr1.NT_028050.13_9030663
RefSNP(rs#)rs12015133
Submitted Batch IDSC-CHRX_NA10470-200402
Submitted DateFeb 20, 2004
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 20 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHRX_NA10470
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleG/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityXSNP55696-27f22.p1k -315 28

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss18052648|allelePos=501|len=837|taxid=9606|alleles='G/T'|mol=Genomic
 gatgtggaga aataggaaca cttttacact gttggtagga ctgtaaacta gttcaaccat
 tgtggaagac agtgtggcga ttcctcaagg atctagaact agaaatacca tttgacccag
 ccatcccatt actgggtgta tacccaaaga attataaatc atgctgctat aaagacacat
 tcacacgtat gtttattgcg gcactattca caatagcaaa gacttggaac caacccaaat
 gcccatcaat gatagactgg attaagaaaa tgtggcacgt atacaccatg gaatactatg
 cagccataaa aaatgatgag ttcatgtcct ttgtagggac atggataaag ctggaaacca
 tcattctgag caaactatca caaggacaaa aaatcaaaca ccgcatgttc tcactcatag
 gtgggaactg aacaatgaga acacttggac atgggaaggg gaacatcaca caccagggcc
 tgcctgtcat ggggtggggg
 K
 atgggggagg gatagcattg ggagctatac ctaatgtaaa tgctgagtta ataggtgcaa
 cacaccaaca tggcacatgt atacatatgt aacaaatgtg cacgttgtgc acatgtaccc
 tagaacttaa agtataTATA TATATATAAA GTACAGGTGT GAGATGAAAA GGATCTGGAC
 TTCTGTTGGC AAAATAGGAA GAGAAAGGGA AAGGATGAAT TATAGTAGTA GCTTGTTTGA
 TATATCAGAA TTAAATATTT ATTTGTTGGC CTACTGTGAT TGAGAGATTT AATGCCTGAG
 TGACTGGGAG AAGCAAAGTG TTTTTTTGTC TGGAGG

  Submitted Frequency for ss18052648 back to top
There is no frequency submission for ss18052648.


  dbSNP summary of Genotypes for ss18052648 back to top
No sufficient data to compute Hardy-weinberg probability for ss18052648.


  Submitted individual genotype for ss18052648 back to top
There is no individual genotype data for ss18052648.

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