Submitter | Handle | SC_SNP | Submitter SNP ID | SC-CHRX_NA10470-200402.chr1.NT_028050.13_9030663 | RefSNP(rs#) | rs12015133 | Submitted Batch ID | SC-CHRX_NA10470-200402 | Submitted Date | Feb 20, 2004 | Publication Cited | [1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP [2] SSAHA: A Fast Search Method for Large DNA Databases | First entry to dbSNP | Feb 20 2004 12:00:00:000AM |
| Resource Links | GenBank Accession | NT_028050
| Submitted Gene Name | N.D | Submitted Gene ID | N.D. | Submitted SNP Synonyms | N.D | Submitted linkout | N.D |
| Assay | Species | Homo sapiens | Molecular Type | Genomic | Method | CHRX_NA10470 | Ascertainment Samplesize | 2 | Population | N.D. |
| Allele | Observed Allele | G/T | Ancestral Allele | N.D. | Allele Origin | N/A | SNP Class | SNV | CpG Code | Unknown |
| | Variation | Frequency Submission | N.D. | Genotype Summary | N.D. | Genotype Submission | N.D. | Haplotype | N.D. |
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Comment | sequence position qualityXSNP55696-27f22.p1k -315 28 |
>gnl|dbSNP|ss18052648|allelePos=501|len=837|taxid=9606|alleles='G/T'|mol=Genomic gatgtggaga aataggaaca cttttacact gttggtagga ctgtaaacta gttcaaccat
tgtggaagac agtgtggcga ttcctcaagg atctagaact agaaatacca tttgacccag
ccatcccatt actgggtgta tacccaaaga attataaatc atgctgctat aaagacacat
tcacacgtat gtttattgcg gcactattca caatagcaaa gacttggaac caacccaaat
gcccatcaat gatagactgg attaagaaaa tgtggcacgt atacaccatg gaatactatg
cagccataaa aaatgatgag ttcatgtcct ttgtagggac atggataaag ctggaaacca
tcattctgag caaactatca caaggacaaa aaatcaaaca ccgcatgttc tcactcatag
gtgggaactg aacaatgaga acacttggac atgggaaggg gaacatcaca caccagggcc
tgcctgtcat ggggtggggg
K
atgggggagg gatagcattg ggagctatac ctaatgtaaa tgctgagtta ataggtgcaa
cacaccaaca tggcacatgt atacatatgt aacaaatgtg cacgttgtgc acatgtaccc
tagaacttaa agtataTATA TATATATAAA GTACAGGTGT GAGATGAAAA GGATCTGGAC
TTCTGTTGGC AAAATAGGAA GAGAAAGGGA AAGGATGAAT TATAGTAGTA GCTTGTTTGA
TATATCAGAA TTAAATATTT ATTTGTTGGC CTACTGTGAT TGAGAGATTT AATGCCTGAG
TGACTGGGAG AAGCAAAGTG TTTTTTTGTC TGGAGG
There is no frequency submission for ss18052648.
No sufficient data to compute Hardy-weinberg probability for ss18052648.
There is no individual genotype data for ss18052648.
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