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Submitted SNP(ss) Details: ss18052657           
Submitter
HandleSC_SNP
Submitter SNP IDSC-CHRX_NA10470-200402.chr11.NT_008984.16_5420869
RefSNP(rs#)rs9667551
Submitted Batch IDSC-CHRX_NA10470-200402
Submitted DateFeb 20, 2004
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 20 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHRX_NA10470
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG Codec/t_g
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityXSNP55696-68o14.q1k 296 51

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss18052657|allelePos=501|len=1001|taxid=9606|alleles='C/T'|mol=Genomic
 gacttcaaac tatactacaa ggctacagta accaaaacag catggtactg gtaccaaaac
 agagatatag atcaatggaa cagaacagag ccctcagaaa taatgccaca tatctacaac
 tatctgatct ttgacaaacc tgagaaaaac aagcaatggg gaaaggattc cctatttaat
 aaatggtgct gggaaaactg gctagccata tgtagaaagc tgaaactgga tcccttcctt
 acaccttata caaaaatcaa ttcaagatgg attaaagatt taaacgttaa acctaaaacc
 ataaaaaccc tagaagaaaa cctaggcatt accattcagg acataggcgt gggcaaggac
 ttcatgtcca aaacaccaaa agcaatggca acaaaagaca aaattgacaa atgggatcta
 attaaactaa agagcttctg cacagcaaaa gaaactacca tcagagtgaa caggcaacct
 acaacatggg agaaaatttt
 Y
 gcaacctact catctgacaa agggctaata tccagaatct acaatgaact caaacaaatt
 tacaagaaaa aaacaaacaa ccccatcaaa aagtgggcga aggacatgaa cagacacttc
 tcaaaagaag acatttatgc agccaaaaaa cacatgaaga aatgctcatc atcactggcc
 atcagagaaa tgcaaatcaa aaccactatg agatatcatc tcacaccagt tagaatggca
 atcattaaaa agtcaggaaa caacaggtgc tggagaggat gcggagaaat aggaacactt
 ttacactgtt ggtgggactg taaactagtt caaccattgt ggaagtcagt gtggcgattc
 ctcagggatc tagaactaga aataccattt gacccagcca tcccattact gggtatatac
 ccaaatgagt ataaatcatg ctgctataaa gacacatgca cacgtatgtt tattgcggca
 ctattcacaa tagcaaagac

  Submitted Frequency for ss18052657 back to top
There is no frequency submission for ss18052657.


  dbSNP summary of Genotypes for ss18052657 back to top
No sufficient data to compute Hardy-weinberg probability for ss18052657.


  Submitted individual genotype for ss18052657 back to top
There is no individual genotype data for ss18052657.

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