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Submitted SNP(ss) Details: ss18052666           
Submitter
HandleSC_SNP
Submitter SNP IDSC-CHRX_NA10470-200402.chr12.NT_009714.16_13085542
RefSNP(rs#)rs6650198
Submitted Batch IDSC-CHRX_NA10470-200402
Submitted DateFeb 20, 2004
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 20 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHRX_NA10470
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleG/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityXSNP55696-2j23.q1k -476 56

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss18052666|allelePos=501|len=1001|taxid=9606|alleles='G/T'|mol=Genomic
 ttggttgcca ttggcatgaa atatcttttt ccctctcttt atattcggtc tatatctgtc
 tttatagatg aaacgtagtg tgttttttaa aggcaacaga tcattaggtc ttattttttt
 aatccattct ctgtcttttg attggagagt tttgtcaatt tatattcaat attcttatta
 ataaagtttt gccattttgt gatttgtttt caggttgttt tgcagtctgc tgtttcttcc
 ttctctcctt cctatcttcc ttttagtgag ggtaactttc tctggtggta tgacttaatt
 tcttggtttt tattttttcc atatccactg tattttattt gtaattacca tgaggcttgc
 acatactgtt ttataaccca ttattttaag ctgataacaa cctcacactg tttgcataaa
 gaaatagaca agtaaaaaga aaactaataa aagctctata ctttaacttt atccccttgc
 tttttaacat tttgtttcta
 K
 ttatatttta ttgtactgtc tgtgtcttga aaagttgtag ctattttttg attggttcat
 catttagtct ttcttcttga gagtaattta cataccacag ttacagtgtt ataatattat
 gaatttttct gtgtacttac tattactagt gagttttgta tctttggctg atttcttatt
 gctcattaac atcctttatt tcagattgaa gacctccctt tagcatttct tgtagaacag
 gtctggtgtt gatgaaatcc ctcagctttt gtttgtctgg aagtctttat ttctccttcg
 tgtttgaagg atattttcac cagatatatt atcctaggat aaaagtgttt tttttttttc
 tccagcactt taaatatgtc atgccactct ctcttggcct gtaaggtttc cactgaaaag
 actgtttcca gatatactgg agctccattg tttgttattt gtttattttc tcttgctgct
 tttagtatcc tttctttatc

  Submitted Frequency for ss18052666 back to top
There is no frequency submission for ss18052666.


  dbSNP summary of Genotypes for ss18052666 back to top
No sufficient data to compute Hardy-weinberg probability for ss18052666.


  Submitted individual genotype for ss18052666 back to top
There is no individual genotype data for ss18052666.

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