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Submitted SNP(ss) Details: ss18052668           
Submitter
HandleSC_SNP
Submitter SNP IDSC-CHRX_NA10470-200402.chr12.NT_029419.10_4601494
RefSNP(rs#)rs1095049
Submitted Batch IDSC-CHRX_NA10470-200402
Submitted DateFeb 20, 2004
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 20 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHRX_NA10470
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG Codec/t_g
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityXSNP55696-52a23.p1k 410 44

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss18052668|allelePos=501|len=1001|taxid=9606|alleles='C/T'|mol=Genomic
 ccaacagacc tgcagctgag ggtcctgtct ggtagaagga aaactaacaa acagaaagga
 catccacacc aaaaacccct ctgtacgtca ccatcatcaa agaccaaagg tagataaaac
 cacaaagatg ggaaaaaaac agagcagaaa aacaggaaac tctaaaaatc agagcatctc
 tcctcctcca aaggaacgca gctcctcacc agcaacagaa caaagcttcg tggagaatga
 ctctgatgag ttgagagaag acggcttcag acgatcaaac tactccgaac tacaggagga
 aattcgaacc aatggcaaag aagttaaaag ctttgaaaaa aaattagatg aatggataaa
 tagaataacc aatgcagaga agtccttaaa ggacctgatg gagctgaaaa ccaaggcaca
 agagctacgt gacgaacgca gaagcctcag taactgatgc gatcaactgg aagaaagggt
 atcagtgatg gaagatgaaa
 Y
 gaatgaaatg aagcgagaag agaagtttag agaaaaaaga ataaaaagaa acgaacaaag
 cctccaagaa atatgggact atgtgaaaag accaaatcta cgtctgattg gtgtacctga
 aagtgacagg gagaatggaa tcaagttgga aaacactctg caggatatta tccagcagaa
 cttccccaat ctagcaaggc aggccaacat tcaaattcaa gaaatacaga gaacgccaca
 aagatattcc tcgagaagag caactccaag acacagaatt gtcagattca ccaaagttga
 aatgaaggaa aaaatcttaa gggcagccag aggttgggtt acccacaaac ggaagcccat
 cagactaaca gctgatctct cagcagaaac tctacaagcc agaagagagt ggggaccaat
 attcaacatt cttaaagaaa agaattttca acccagaatt tcatatccag ccaaactaag
 cttcataact gaaggagaaa

  Submitted Frequency for ss18052668 back to top
There is no frequency submission for ss18052668.


  dbSNP summary of Genotypes for ss18052668 back to top
No sufficient data to compute Hardy-weinberg probability for ss18052668.


  Submitted individual genotype for ss18052668 back to top
There is no individual genotype data for ss18052668.

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