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Submitted SNP(ss) Details: ss18057461           
Submitter
HandleSC_SNP
Submitter SNP IDSC-CHR13_NA17119-200402.chr1.NT_077988.2_25622
RefSNP(rs#)rs9658989
Submitted Batch IDSC-CHR13_NA17119-200402
Submitted DateFeb 20, 2004
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 20 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR13_NA17119
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleA/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityChr_13_17119_2-539i12.q1k 354 56Chr_13_17119_2-426e01.q1k -282 41

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss18057461|allelePos=501|len=1001|taxid=9606|alleles='A/C'|mol=Genomic
 acattcttct cagcaccgca ttgtacttat tctaaaattg accacataat tggaagtaaa
 acactcctca ggaaatgcaa aagaatggaa atcataacaa acagtctctc agaccacaat
 gtattcaaat tagtatgcag gattaagaaa ctcactcaaa acctcacaac tacatggaaa
 ctgggcaacc tgctcctgaa tgactactgg gtaaataacg aaatgaaggc agaaataaag
 atgttcttca aaaccaatga gaacaaagac acaacgtacc agaatctctg ggacacattt
 aaagcagtgt gtagagggaa atttatagca ctaaatgccc acaagagaaa gcaggaaaga
 tctaaaattg acaccttaac atcaaaatta aaagaactag agaagaaaga acaaacaaat
 tcaaaagcta ggagatgaca agacataaat aagatcagag cagaattgaa cgagatagag
 acatgaaaaa cccttcaaaa
 M
 atcaatgaat ccaggagctg gttttttgaa aagatcaaca aaacagacca ctagccagac
 taataaagaa gaaaagacag aagaatcaaa tagatgcaat aaaaaatgat taaggggata
 tcaccactga tcccacagaa atacaaatta tcatcagaga atactaccaa gactaaacat
 ggaagaagtc aaattcctga atagaccaat aacaagttct gaaattgagg cattaatcta
 tagcctacca accaaaaaaa gtccaggacc agacggattc acagccaaat tctaccagag
 gtacaaagag gagctggtac cattccttct gaaactattc caaacaatag aaaaagagaa
 tcctccctaa ctcattttat gaggccaaca caacaaaaaa aaggaaattt taggccaata
 tccctgatga acatcaatgc agaaatcctg aataaaatac tggaaaattg aatccagcag
 catatcaaaa agcttgtcca

  Submitted Frequency for ss18057461 back to top
There is no frequency submission for ss18057461.


  dbSNP summary of Genotypes for ss18057461 back to top
No sufficient data to compute Hardy-weinberg probability for ss18057461.


  Submitted individual genotype for ss18057461 back to top
There is no individual genotype data for ss18057461.

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