NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss18057474           
Submitter
HandleSC_SNP
Submitter SNP IDSC-CHR13_NA17119-200402.chr1.NT_077387.2_115140
RefSNP(rs#)rs10437145
Submitted Batch IDSC-CHR13_NA17119-200402
Submitted DateFeb 20, 2004
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 20 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR13_NA17119
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleA/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityChr_13_17119_2-477j11.q1k -388 51Chr_13_17119_2-422j21.q1k -159 45

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss18057474|allelePos=501|len=1001|taxid=9606|alleles='A/C'|mol=Genomic
 cctggatggc atctccttct agtagagggc tgttttgtct ccattgcaaa tctgtttagt
 gtagccatct taatcagtta ccttctagat agctttctgc agcttttcca tcagtacttg
 ctgctttatc ttgtgctttt atgttatgga gatgactttt ttccttaaac ctcaagaaac
 aagctcttct agcttcagac ttttcttctg cagctgcctc acctaagtct tcatagaatt
 gaagagaggc cgggtgcggt ggctgtcaca cctgtaatcc tagcactttg ggaggccgag
 gcaggcagat cacctgaggt cgggagttca acaccagcct gaccaacgtg gagaaaccct
 gtctctacta aaaatacaaa aaattagcca ggcgtggtgg tgcatgactg taatcccagc
 tactcgggat gctgaggcag gagaatggct tgaaattggg aggcagaggt tgtgatgagc
 caagatcaca ccattgcact
 M
 cagcttgggc aagaagaatg aaactctgtc tcaaaaacaa agaaaaataa gtaaaaagag
 agttaggctt gggcttaatg gaatgttttc tgtttttttt tttttatctt ctatctagac
 caattaaact ttcttcataa cagcagcaag attgtttagc tttttatcat tcatgtgttc
 actggagtag tactttaaat ttctttccag aacacttcct ttgcattcac aacttggcta
 agtgtttgtt gcatgagttc tagctactga cctgtcttgc ttacagcatg ccttcctcac
 taagcttaat tatttcttcc ttttggttta aagtgacaga catgcaactc ttctttcgct
 tgaacatata gaggctattg tagggttatt aattggccac attttaatat taataaaaag
 aagcctgaga aaaagtgaga gaaagagaaa tgtcccattg gtggggcagt cagaacaaac
 gcatttgtca attgtttgcT

  Submitted Frequency for ss18057474 back to top
There is no frequency submission for ss18057474.


  dbSNP summary of Genotypes for ss18057474 back to top
No sufficient data to compute Hardy-weinberg probability for ss18057474.


  Submitted individual genotype for ss18057474 back to top
There is no individual genotype data for ss18057474.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement