Submitter | Handle | SC_SNP | Submitter SNP ID | SC-CHR13_NA17119-200402.chr1.NT_077387.2_115140 | RefSNP(rs#) | rs10437145 | Submitted Batch ID | SC-CHR13_NA17119-200402 | Submitted Date | Feb 20, 2004 | Publication Cited | [1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP [2] SSAHA: A Fast Search Method for Large DNA Databases | First entry to dbSNP | Feb 20 2004 12:00:00:000AM |
| Resource Links | GenBank Accession | NT_077387
| Submitted Gene Name | N.D | Submitted Gene ID | N.D. | Submitted SNP Synonyms | N.D | Submitted linkout | N.D |
| Assay | Species | Homo sapiens | Molecular Type | Genomic | Method | CHR13_NA17119 | Ascertainment Samplesize | 3 | Population | N.D. |
| Allele | Observed Allele | A/C | Ancestral Allele | N.D. | Allele Origin | N/A | SNP Class | SNV | CpG Code | Unknown |
| | Variation | Frequency Submission | N.D. | Genotype Summary | N.D. | Genotype Submission | N.D. | Haplotype | N.D. |
|
Comment | sequence position qualityChr_13_17119_2-477j11.q1k -388 51Chr_13_17119_2-422j21.q1k -159 45 |
>gnl|dbSNP|ss18057474|allelePos=501|len=1001|taxid=9606|alleles='A/C'|mol=Genomic cctggatggc atctccttct agtagagggc tgttttgtct ccattgcaaa tctgtttagt
gtagccatct taatcagtta ccttctagat agctttctgc agcttttcca tcagtacttg
ctgctttatc ttgtgctttt atgttatgga gatgactttt ttccttaaac ctcaagaaac
aagctcttct agcttcagac ttttcttctg cagctgcctc acctaagtct tcatagaatt
gaagagaggc cgggtgcggt ggctgtcaca cctgtaatcc tagcactttg ggaggccgag
gcaggcagat cacctgaggt cgggagttca acaccagcct gaccaacgtg gagaaaccct
gtctctacta aaaatacaaa aaattagcca ggcgtggtgg tgcatgactg taatcccagc
tactcgggat gctgaggcag gagaatggct tgaaattggg aggcagaggt tgtgatgagc
caagatcaca ccattgcact
M
cagcttgggc aagaagaatg aaactctgtc tcaaaaacaa agaaaaataa gtaaaaagag
agttaggctt gggcttaatg gaatgttttc tgtttttttt tttttatctt ctatctagac
caattaaact ttcttcataa cagcagcaag attgtttagc tttttatcat tcatgtgttc
actggagtag tactttaaat ttctttccag aacacttcct ttgcattcac aacttggcta
agtgtttgtt gcatgagttc tagctactga cctgtcttgc ttacagcatg ccttcctcac
taagcttaat tatttcttcc ttttggttta aagtgacaga catgcaactc ttctttcgct
tgaacatata gaggctattg tagggttatt aattggccac attttaatat taataaaaag
aagcctgaga aaaagtgaga gaaagagaaa tgtcccattg gtggggcagt cagaacaaac
gcatttgtca attgtttgcT
There is no frequency submission for ss18057474.
No sufficient data to compute Hardy-weinberg probability for ss18057474.
There is no individual genotype data for ss18057474.
|