Submitter | Handle | SC_SNP | Submitter SNP ID | SC-CHR13_NA17119-200402.chr1.NT_077988.2_26315 | RefSNP(rs#) | clustering in process | Submitted Batch ID | SC-CHR13_NA17119-200402 | Submitted Date | Feb 20, 2004 | Publication Cited | [1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP [2] SSAHA: A Fast Search Method for Large DNA Databases | First entry to dbSNP | Feb 20 2004 12:00:00:000AM |
| Resource Links | GenBank Accession | NT_077988
| Submitted Gene Name | N.D | Submitted Gene ID | N.D. | Submitted SNP Synonyms | N.D | Submitted linkout | N.D |
| Assay | Species | Homo sapiens | Molecular Type | Genomic | Method | CHR13_NA17119 | Ascertainment Samplesize | 2 | Population | N.D. |
| Allele | Observed Allele | G/A | Ancestral Allele | N.D. | Allele Origin | N/A | SNP Class | SNV | CpG Code | c_g/a |
| | Variation | Frequency Submission | N.D. | Genotype Summary | N.D. | Genotype Submission | N.D. | Haplotype | N.D. |
|
Comment | sequence position qualityChr_13_17119_2-370e11.p1k 277 51 |
>gnl|dbSNP|ss18057484|allelePos=501|len=1001|taxid=9606|alleles='G/A'|mol=Genomic attcctgaat agaccaataa caagttctga aattgaggca ttaatctata gcctaccaac
caaaaaaagt ccaggaccag acggattcac agccaaattc taccagaggt acaaagagga
gctggtacca ttccttctga aactattcca aacaatagaa aaagagaatc ctccctaact
cattttatga ggccaacaca acaaaaaaaa ggaaatttta ggccaatatc cctgatgaac
atcaatgcag aaatcctgaa taaaatactg gaaaattgaa tccagcagca tatcaaaaag
cttgtccacc atgaccaagt tggcttcatc cctgggatgc aaggctggtt caacatgcaa
atcaataaat gtaatccatc acataaacgg aatcaatgac aaaaactaca tgattatctc
aatagatgca gaaaaggcct ttgacaaaat tcaacagccc ttcatgctaa aaactctcaa
taaactggta ttgatggaac
R
tatctcaaaa tattaagtgc tatttatggc aaacccacag ccaataacat actgaatgtg
caaaaactgg aagcattccc tttgaaaatc agcacaagac aaggatgccc tctctcacta
ctcctattcc acatagtgtt ggaagttctg gccagggtaa tcaggcaaga gaaagaaata
catggtgttc aattaggaaa agaagaagtc aaattgtctc tgtttgcaga tgacatgatt
atatatttag aaaaccccat cgtctcagcc caaaatctcc ttaagctgat aagcaacttc
agcaaagttt taggataaaa aattaatgtg caaaaatcac aagctttctt atacaccaat
aacagacaaa cagagagcca aactatgagt gaactcccat tctccattgc tacaacaaga
atgaaatacc taggaataca acttacaagg atgtgaagga cctcttcaag gagaactata
aaccactcct caaggaaaca
There is no frequency submission for ss18057484.
No sufficient data to compute Hardy-weinberg probability for ss18057484.
There is no individual genotype data for ss18057484.
|