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Submitted SNP(ss) Details: ss18062642           
Submitter
HandleSC_SNP
Submitter SNP IDSC-CHR13_NA07340-200402.chr1.NT_021877.16_4691895
RefSNP(rs#)rs11119673
Submitted Batch IDSC-CHR13_NA07340-200402
Submitted DateFeb 20, 2004
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 20 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR13_NA07340
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleT/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality13S07_2-171p18.q1k 495 41

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss18062642|allelePos=501|len=1001|taxid=9606|alleles='T/A'|mol=Genomic
 ggcaacagag cgagactcca tctcaaaaaa aaaaaaaata gagagagaga gacagaaagt
 cattaatgat gataaatgag tcaaatgata agagtcgatt tagccagagg atataacaat
 tgtaaataca tatgcaccca atggtagtgc acccatatat gtaaagcaaa tattattagt
 gctaaagaga gagggagatt cctggggctg ggcacggtgg cttatgcctg taatcccagc
 actttgggag gctgaggcgg gtggatcatg aggtcaggag atcgagacca tcctggttaa
 cacggtgaaa ctacgtctct actaaaaaat ataaaaaatt agccggacgt ggtggtgggc
 acctgtagtc ccagctactc gggaggctga ggcaggagaa tggcgtgaac ccgggaggtg
 gagcttgcag tgagccgaga ttgcgccact gcactccagc ctgggcgaca gagcgagact
 ccatctcaag aaaaaaagag
 W
 gagagagaga gagagagaga gattcccaat acaataatag ctagagactt ctacacctca
 ctttcagcac tggacagatc atctggacag aaaataaaga aacatgggat ttaatctaca
 ctacagacct aacaaatgtt tacaaaacat ttcatccaac acctgcaaaa tacacattct
 tctcctcaga acatgaataa ttcttaagga aagaccataa attagaccac aaatcaagtc
 ttaaaatgtt caaaaaattt aaattatatc aagtatcttc tctgatcaca agagaataaa
 actggaaatc aataacaaga ggaattttgg aaactataca aacacatgga aatttaaaaa
 tatgctccta aatgatcagc gggtcaatga agaaatgaag aagaaaattg aaaaatttct
 tgaaacaaat gaaaatggaa acataacata ccaaaaccta tgggatacag caaaagcact
 actaagagaa aagtttataC

  Submitted Frequency for ss18062642 back to top
There is no frequency submission for ss18062642.


  dbSNP summary of Genotypes for ss18062642 back to top
No sufficient data to compute Hardy-weinberg probability for ss18062642.


  Submitted individual genotype for ss18062642 back to top
There is no individual genotype data for ss18062642.

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