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Submitted SNP(ss) Details: ss18062653           
Submitter
HandleSC_SNP
Submitter SNP IDSC-CHR13_NA07340-200402.chr1.NT_077988.2_26826
RefSNP(rs#)rs9659325
Submitted Batch IDSC-CHR13_NA07340-200402
Submitted DateFeb 20, 2004
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 20 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR13_NA07340
Ascertainment Samplesize5
PopulationN.D.
Allele
Observed AlleleA/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality13S07_2-387h13.p1k 218 5613S07_2-288m16.q1k 613 4013S07_2-409d09.p1k 813 2713S07_2-419h23.p1k 607 56

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss18062653|allelePos=501|len=1001|taxid=9606|alleles='A/C'|mol=Genomic
 tattaagtgc tatttatggc aaacccacag ccaataacat actgaatgtg caaaaactgg
 aagcattccc tttgaaaatc agcacaagac aaggatgccc tctctcacta ctcctattcc
 acatagtgtt ggaagttctg gccagggtaa tcaggcaaga gaaagaaata catggtgttc
 aattaggaaa agaagaagtc aaattgtctc tgtttgcaga tgacatgatt atatatttag
 aaaaccccat cgtctcagcc caaaatctcc ttaagctgat aagcaacttc agcaaagttt
 taggataaaa aattaatgtg caaaaatcac aagctttctt atacaccaat aacagacaaa
 cagagagcca aactatgagt gaactcccat tctccattgc tacaacaaga atgaaatacc
 taggaataca acttacaagg atgtgaagga cctcttcaag gagaactata aaccactcct
 caaggaaaca agagaggaca
 M
 aaacaaatgg aaaaacattc catgctcatc aataggaaga atcaatatcg tgaaaatggc
 catactaccc aaagtaattt atagattcac tgctatcccc attaaactct attgactttc
 tccacagaat tggaaaaata tattttaaat ttcatacgga atcaaaaaga gcccgaatag
 ccaagacaat cctaagcaaa aagaacaaag cttcaagcat catgctacct gacttcaaac
 tatactacaa ggctacgata aacaaaagaa catggtactg gtaccaaaac agatatatag
 atcaaaggaa cagaaccgaa ccctcagaaa taacaccaca tatctacaac catctgatct
 ttgacaaacc tgagaaaaac aagcactggg gaaaggattc cctatttaat aaatggtgtt
 gagaaaactg gctagcctta ggcagaaagc tgaaactgga tcccttcctt acaccttata
 taaaaattaa ctcaagatgA

  Submitted Frequency for ss18062653 back to top
There is no frequency submission for ss18062653.


  dbSNP summary of Genotypes for ss18062653 back to top
No sufficient data to compute Hardy-weinberg probability for ss18062653.


  Submitted individual genotype for ss18062653 back to top
There is no individual genotype data for ss18062653.

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