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Submitted SNP(ss) Details: ss18069701           
Submitter
HandleSC_SNP
Submitter SNP IDSC-CHR1_NA11321-200402.chr1.NT_019273.16_5062939
RefSNP(rs#)rs12021500
Submitted Batch IDSC-CHR1_NA11321-200402
Submitted DateFeb 20, 2004
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 20 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR1_NA11321
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG Codec/t_g
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityS1A_2-252l16.q1k 674 40

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss18069701|allelePos=501|len=1001|taxid=9606|alleles='T/C'|mol=Genomic
 cagagaccat tgcggcagcc ccttccatca caggcctgga gaccgaggag gaaaaaattg
 ttcagtgggc tgggccggga tccctctgct gtgtgcagtc tagggacttg gtgccctgtg
 tcccagccac tccagctgtg actaaaaggg gccaaggtac agctcgggcc atggcttcag
 aggttgcagg ccctaagctc tggcagtttc catgtggtgt tgagcctgca ggtgcataga
 agtcaagaat tgagatttgg aaacctctgc ctagatttca gaggatttat ggaaatgctt
 ggatgtccag gcagaagttt gctgcgggga tggggcactc atggagaacc tttgctaagg
 cagtgccaaa gcaaaatgtg gggtgggtat gcccacagag agtccccact ggggtgctgc
 ctcgtggaga tgtgagaaga gggccaccat cctccagacc ccagaatggt agatccacag
 acagcttgca ccagaaaagc
 Y
 gcagacactc aacaccagcc catgaaaaca gccaggaagg aggctgtacc ctgcaaagcc
 acagggacag agctgcccaa gaccatggga acccacctct ggcatcagca tgacctggat
 gtgagacatg gagtctaagg ggataatttt ggagctttaa gatttgactg ccctactaga
 tttcggactt gcatggggtc tttagcccct ttgtttagcc aatttctccc atttggaatg
 ggtgtattta tccaatgcct gtatccccat tgtgtctagg aagttactaa cttgcttttg
 attttgcagg ctcataggca gaagggactt gccttgtctc agttgagaca tttgactgaa
 cttttgagtt aatgctgaaa tgagttaaga ctttggggaa ctgttagaag acatgattgg
 ttttgaaatg tgaagagatg agatttggga gggaccctgg gcagaatgat atggtttggc
 tgtgttccca cccaaatctc

  Submitted Frequency for ss18069701 back to top
There is no frequency submission for ss18069701.


  dbSNP summary of Genotypes for ss18069701 back to top
No sufficient data to compute Hardy-weinberg probability for ss18069701.


  Submitted individual genotype for ss18069701 back to top
There is no individual genotype data for ss18069701.