NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss18069707           
Submitter
HandleSC_SNP
Submitter SNP IDSC-CHR1_NA11321-200402.chr1.NT_004836.15_11877440
RefSNP(rs#)rs12021503
Submitted Batch IDSC-CHR1_NA11321-200402
Submitted DateFeb 20, 2004
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 20 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR1_NA11321
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleG/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityS1A_2-595m10.p1k -149 45

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss18069707|allelePos=501|len=1001|taxid=9606|alleles='G/A'|mol=Genomic
 GCTcctcttt ctctttgtta attgctattg ctttaaagtt tgttttctct gatgtaagaa
 tagctactcc tgctcctgct cccttttgtt gtccatttgc atggagtatc tttttccacc
 tctttacctt aggtttatgt gagtccttat gtgtcaggtg agtctcttga agacagctga
 taacttggtt ggtgaattct tttcttcttt tttttttttt gagacagagt ctcactctgt
 cacccaggct ggagtgcagt ggcaccatct cagctcactg caacctccat ctcccgggtt
 caagcgatcc tcctgcctca gccacccgaa tagctgggac tacaagcatg caccaccacg
 cccaactaat ttttgtattt ttagcagaga tgaggtttca ccatattggc caggctggtg
 ttgaactcct gacctcgtga tctgcccgct tcggcctccc aaagtgttgg gattacaggc
 atgagccacc gtgcccagtg
 R
 tgaattctta tccattctgc cattttgtat cttttaagtg ggggcattta gatcatttac
 attcaacgtt agcattgaga tgtaaggtac ccttctatta atcatgctgc aagttgctgc
 ctgaatacct tggttttttt tctttttttt cattgtgtta ttgttttata ggtcctgtga
 ggtttatgct ttaaggaggt tctattttgg tgtatttttt gaagttctgt ttcatgattt
 agaactcctt tAggccaggt gcggtggctc acacctgtaa tcccagcact ttgggaggcc
 gaggcgggtg gatcacgagg tcaggagatc gagaccatcc tggctaacat ggtgaaaccc
 cgtctctatt aaaaatacaa aaaattagcc gggcgtggtg gcaagcgcct gtagtcccag
 ctacttggga ggctaaggca ggagactcca gcctgggcga cagagcgaga ctccgtctcc
 aagaaaaaaa aaaacaaaaa

  Submitted Frequency for ss18069707 back to top
There is no frequency submission for ss18069707.


  dbSNP summary of Genotypes for ss18069707 back to top
No sufficient data to compute Hardy-weinberg probability for ss18069707.


  Submitted individual genotype for ss18069707 back to top
There is no individual genotype data for ss18069707.