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Submitted SNP(ss) Details: ss18069709           
Submitter
HandleSC_SNP
Submitter SNP IDSC-CHR1_NA11321-200402.chr1.NT_032977.6_25320966
RefSNP(rs#)rs12021504
Submitted Batch IDSC-CHR1_NA11321-200402
Submitted DateFeb 20, 2004
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 20 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR1_NA11321
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityS1A_2-1026n12.q1k -294 23

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss18069709|allelePos=501|len=1001|taxid=9606|alleles='C/T'|mol=Genomic
 TTTAGAAAGA CAAATTGAAT TGCTATAAGG AATATGGATC CTTTCAAAGT ACTGCTCAAG
 ATTGACATCA CTGTATCTAA ATTATCTTTC ATTTGTTTTT AAGATGTTCA TCTCAAGAAC
 CAGCATGCTA GTACTCACTT TGTTATATAT CACATATTAC ATTGATCAAA GTATTTCTTT
 TGGCTGGATC CTAGATTTAG CCTCAGAATT TTCCTCAACA CAagccagtc acagtggctc
 atgcctgtaa tcccatcact ttgggaggct ggatcacttg agatcagaag tttgatacca
 acctggccaa catggtgaaa ccccatctct actaaaaata caaaaattag ctaaattagc
 tgagcatggt ggtgcacacc tgtagtccca gctacttggg aggctgaagt gggagaatcg
 cttgaaccca caggcagagg ttgcagtgag ccaatattgc atcactgcac tccagccagg
 gtgacagagt gagactccat
 Y
 tcaaaaaaaa aaaaaaaaaa aaaaaagaaT TTTCCTCAGC GCGATTCTCC TATTCTTCTA
 GCAGCAATGA TCAATTGAAG AAACTTCTTT GCAGGCCCGG GCACTGTAAA AAAGAACAGG
 ATTTggccgg gcgcggtggc tcacgcccat aatcccagca ctttgggagg ccgaggcagg
 tggatcacga ggtcaggaaa cagagatgac caacatggtg aaaccccatc tctactaaaa
 attcaaaaat tagccgggcg tgttggcgtg tgcctctagt cccagctact caggaggctg
 aagcaggaga atcgcttgaa cgcaggaggc ggaggttgcc gtgagccgag accgtgccac
 tgcactccag cctgggccac acagcgagac actgtctcaa aaaaaaaaaa aaaGgccggg
 tgcggtggct cacgcctgta atcccagcac tttgggaggc caaagtgggc agatcatgag
 gtcaggagat catcctggct

  Submitted Frequency for ss18069709 back to top
There is no frequency submission for ss18069709.


  dbSNP summary of Genotypes for ss18069709 back to top
No sufficient data to compute Hardy-weinberg probability for ss18069709.


  Submitted individual genotype for ss18069709 back to top
There is no individual genotype data for ss18069709.