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Submitted SNP(ss) Details: ss18069710           
Submitter
HandleSC_SNP
Submitter SNP IDSC-CHR1_NA11321-200402.chr1.NT_004321.15_879573
RefSNP(rs#)rs12021505
Submitted Batch IDSC-CHR1_NA11321-200402
Submitted DateFeb 20, 2004
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 20 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR1_NA11321
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 4
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityS1A_2-620p07.p1k -139 39

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss18069710|allelePos=498|len=698|taxid=9606|alleles='C/T'|mol=Genomic
 AAACACACTT GTAGCTGGCA ACATCCACTC GTGTATAATG AAAACACACA ATGGCTTTCT
 TAGAAGTTTG CCTTCTTAAG TGGGTTACAC AGGATGCCTC GAAAATCCTT CTCTGTGGGT
 CGTGCAGAAG GTATTTTATT CTAAAAATTC CCTCTACTCa gccgggcgca gtggctcacg
 cctgtaatcc cagcattttg ggaggctgag gcgggtggat cacgaggtca ggagatcaag
 accatcctgg ctaacacggt gaaaccccgt ctctactaaa aatacaaaaa attagtcggg
 cgtggtgcgg gcacctgtag tcccagctac ccaggaggct gaggcaggag aatggcgtga
 acccggaagg cggagcttgc agtgagctga gatcacgcac tacactccag cctgggcgac
 agagcgagac tacgtctcaa aaaaaaaaaa aaaaaaTCCC TCTGCTCATT GGCATTTGAG
 TGTAAGACAG CTTATAC
 Y
 AAAGTGGGCT CAGACAGACA TATGCACATG TTTACAGACT TTCTGCCTGC CCCCTGGCAG
 TCCACTCTGT GCTCAGTATT TCTTTGCAGG CTAAACACTC GCTCATCCAA AGTGCTTTCT
 TTTCCTGGAC AAGTTGCACA TCACAGACCC AAAGAAGAAA AAGATAATCC AGCCCAACTC
 TTGTTTTTTA ATGTTTCCTG

  Submitted Frequency for ss18069710 back to top
There is no frequency submission for ss18069710.


  dbSNP summary of Genotypes for ss18069710 back to top
No sufficient data to compute Hardy-weinberg probability for ss18069710.


  Submitted individual genotype for ss18069710 back to top
There is no individual genotype data for ss18069710.