Submitter | Handle | SC_SNP | Submitter SNP ID | SC-CHR1_NA11321-200402.chr1.NT_079484.1_3526547 | RefSNP(rs#) | rs10908530 | Submitted Batch ID | SC-CHR1_NA11321-200402 | Submitted Date | Feb 20, 2004 | Publication Cited | [1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP [2] SSAHA: A Fast Search Method for Large DNA Databases | First entry to dbSNP | Feb 20 2004 12:00:00:000AM |
| Resource Links | GenBank Accession | NT_079484
| Submitted Gene Name | N.D | Submitted Gene ID | N.D. | Submitted SNP Synonyms | N.D | Submitted linkout | N.D |
| Assay | Species | Homo sapiens | Molecular Type | Genomic | Method | CHR1_NA11321 | Ascertainment Samplesize | 2 | Population | N.D. |
| Allele | Observed Allele | C/T | Ancestral Allele | N.D. | Allele Origin | N/A | SNP Class | SNV | CpG Code | Unknown |
| | Variation | Frequency Submission | N.D. | Genotype Summary | N.D. | Genotype Submission | N.D. | Haplotype | N.D. |
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Comment | sequence position qualityS1A_2-381m20.q1k -376 56 |
>gnl|dbSNP|ss18069712|allelePos=258|len=458|taxid=9606|alleles='C/T'|mol=Genomic AGCATGGGGC TGAGTAACTG GGACCAGGAC AGCAGCGTGA GAAGCAGGCA TCTGAGGCCA
TTCTCCCCAG CTGGGGGCCT CTGATACCTT CTGACTCAAT ccccaaccct caaccctcat
gtccacttcc agcctcaacc ccaaccccaa tcttaacAAG AACCTTCAAC TTCCACTAAG
CCCAAAGCCT CATTGAAGGC TGCATCCATG CACCCTGGTC CCTGTGCCCA CTGGAGCCCC
ACTGCCCTTG GGCAGGA
Y
CAGAAAGGGG CTCGGAGGTG GCGAGACAGC AGCACCACTC TCCCCAGCCC TTCTCCTCTT
GTCTCCACTG GGAAGGAGTT GGTGAGACGA GCAGGACTTC TCTCTGCCAC GGGAGCATCA
TCTCTGTGTC TCTCCAGCCT CACAAGCCTG GATCTGCCCT CACCATCACA GGGGCTCTCG
TGATAAGCAG GAGACTTCAC
There is no frequency submission for ss18069712.
No sufficient data to compute Hardy-weinberg probability for ss18069712.
There is no individual genotype data for ss18069712.
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