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Submitted SNP(ss) Details: ss18069713           
Submitter
HandleSC_SNP
Submitter SNP IDSC-CHR1_NA11321-200402.chr1.NT_004433.16_477460
RefSNP(rs#)rs10797588
Submitted Batch IDSC-CHR1_NA11321-200402
Submitted DateFeb 20, 2004
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 20 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR1_NA11321
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityS1A_2-555b10.p1k 233 51S1A_2-1019k18.q1k 203 43S1A_2-237e15.q1k -560 32

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss18069713|allelePos=201|len=701|taxid=9606|alleles='T/C'|mol=Genomic
 TTAATTGATT TCTGGTTAAT GGGTCAAAAG TCAAAACTTT TTTCCTTACA GATAGAATGC
 TATAGTTGTA GCTGTAGACT TAGAAACACG TTTAATAGTA CAAATAGTGA CCACTAAAAG
 TCACAAAGAG AAAACAAAAA TATATGATTT TATGATTTAC AAGTAATATA GAACATAAAA
 CATTTATTTT ATCTATTTAC
 Y
 TATTGCCTAC ATTTCCTATG TAACTattgc ctatatttga cgattgttga actacaaaaa
 cagcaatttc agatggttca acccaGTATT TATTTGTTTA GCATTGCAAG ACAAGTTATT
 CAATTTACTT TTTATTAACT GTATGCAAGT ATAACTTACA AGCAGAAAGT GCAAAAATCA
 TACATTTGTG GCTTTACTTA TCATAATTTA ATACACTCAG AAAACTACAA CCTGGCTCAG
 AAGACCCCAA CACCCTTGTG TACATGATAT ATTCCTTTAT TTATTCAATT CTTATTTAAT
 TTTTCTCAGT AATGTTTGAT AGTTTCTGTG CATATGTCTT GCACATATAC ATAGTTTCTG
 TATGCCTTAG TATATTTATT ACTAAGTGTT TGATGGTTTG CAATGCTAAT GTAAATGGTG
 TCATTTTATA AATCTCATTT TCTGCTTATT GTTGGTATAA GAAAAATAAT CATTAGTGTT
 AAATTTATGA TTCTAAATAA

  Submitted Frequency for ss18069713 back to top
There is no frequency submission for ss18069713.


  dbSNP summary of Genotypes for ss18069713 back to top
No sufficient data to compute Hardy-weinberg probability for ss18069713.


  Submitted individual genotype for ss18069713 back to top
There is no individual genotype data for ss18069713.