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Submitted SNP(ss) Details: ss18069716           
Submitter
HandleSC_SNP
Submitter SNP IDSC-CHR1_NA11321-200402.chr1.NT_021937.16_3136003
RefSNP(rs#)rs10864372
Submitted Batch IDSC-CHR1_NA11321-200402
Submitted DateFeb 20, 2004
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 20 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR1_NA11321
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleT/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityS1A_2-856m06.p1ka 73 29

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss18069716|allelePos=398|len=698|taxid=9606|alleles='T/A'|mol=Genomic
 TGGTGGGGGG TTCCTGCAGC ATGGGGAGGT GGGGGCTGTG TTCCTGTTGG GGGCATGGAA
 GGACAACTGG GCCCTTGGGA GGAAATGAGG AAGAGGCCCC AGGAGCAGCA CAGGAAGAGC
 AAAGCCAAGG ATCCCTCCAT GCATTCACCA GCTGGAAATA AGTCAAACGA GAGCAAAAAT
 TTACGTATAA AACACTCTCA ggccgggcac ggtggctcac gcctgtaatc ccagcacttt
 gggaggccaa ggtgggtgga tcacctgagg tcaggagtta gagatcagcc tggccaacat
 ggtgaaaccc cgtctctact aaaaatacaa aaattagcca ggcgtggtgg tgcatgcctg
 taatcccagc tactccggag gctgatgccg gataatc
 W
 cttgaatctg ggaggcagag gttgcagtga gccaagattg caccactgca ctccaacctg
 ggtgacacag cgagaccctg tctcaaaaaa aaaaaaaaaa GACTTCCATT GATTTCAAAA
 CACTGTCTTG CTCCCAGGGC CAGCAGTTGC CACAGGAAAG TTAGAGGTTA GCACCAAAGC
 CCCCCAAACA CCAGAGTCCT TGGAGTTGAC CTCGTTGTCT TTTTGGCCTC CTTCTGGGGG
 ACCTGCTTCT GCTTTCTGGA AGGTGCCTCC GTGGGTCCCC GCCCAGCAGG CCCTGGCCTC

  Submitted Frequency for ss18069716 back to top
There is no frequency submission for ss18069716.


  dbSNP summary of Genotypes for ss18069716 back to top
No sufficient data to compute Hardy-weinberg probability for ss18069716.


  Submitted individual genotype for ss18069716 back to top
There is no individual genotype data for ss18069716.