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Submitted SNP(ss) Details: ss18069720           
Submitter
HandleSC_SNP
Submitter SNP IDSC-CHR1_NA11321-200402.chr1.NT_004836.15_4524934
RefSNP(rs#)rs10925924
Submitted Batch IDSC-CHR1_NA11321-200402
Submitted DateFeb 20, 2004
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 20 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR1_NA11321
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleT/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusbyFreq
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityS1A_2-329m23.p1k 217 56

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss18069720|allelePos=201|len=401|taxid=9606|alleles='T/G'|mol=Genomic
 GCTTTACCAG AGGAAATATT AGATATTTCA TGAAAACTAA CCTTATATGA TTCGCTCACA
 GGGTACTTCC AAGGTATTTC TAAGCTGAGT CATGAGTGCG TGGGTGTTAA TAAATGCACA
 CACATTATGG ACAGTTTACA GGTATGATAA GTTTTACAAT AAAAATTAGT CTTGCATTAA
 GTTCTGTTTG TGGTAAAGAT
 K
 ATTACTATAA TTAATTTTAT GTAGCTTAGT CATTTCCTAC TCCTAATATT TGAAGATAGC
 AAATTATGGT CCAAGTTCTA TTTTGTTTTC TTTACTACTA TTATCAGTTT TCAGACATGC
 AGTTAAAGAT GAAGTTAGAT AAGAAACATG AAATGCTCAG TAATATATTA GTAAAAATGA
 AGGGGATTCA TAAAATGTGT

  Submitted Frequency for ss18069720 back to top
There is no frequency submission for ss18069720.


  dbSNP summary of Genotypes for ss18069720 back to top
No sufficient data to compute Hardy-weinberg probability for ss18069720.


  Submitted individual genotype for ss18069720 back to top
There is no individual genotype data for ss18069720.