| Submitter | | Handle | SC_SNP | | Submitter SNP ID | SC-CHR1_NA17109-200402.chr1.NT_004487.16_3357100 | | RefSNP(rs#) | rs12057138 | | Submitted Batch ID | SC-CHR1_NA17109-200402 | | Submitted Date | Feb 20, 2004 | | Publication Cited | [1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases | | First entry to dbSNP | Feb 20 2004 12:00:00:000AM |
| | Resource Links | | GenBank Accession | NT_004487
| | Submitted Gene Name | N.D | | Submitted Gene ID | N.D. | | Submitted SNP Synonyms | N.D | | Submitted linkout | N.D |
| | Assay | | Species | Homo sapiens | Molecular
Type | Genomic | | Method | CHR1_NA17109 | | Ascertainment Samplesize | 2 | | Population | N.D. |
| | Allele | | Observed Allele | T/C | | Ancestral Allele | N.D. | | Allele Origin | N/A | | SNP Class | SNV | | CpG Code | Unknown |
| | | Variation | | Frequency Submission | N.D. | | Genotype Summary | N.D. | | Genotype Submission | N.D. | | Haplotype | N.D. |
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| Comment | | sequence position qualityS1AA_3-223p21.p1k 197 51 |
>gnl|dbSNP|ss18135774|allelePos=201|len=691|taxid=9606|alleles='T/C'|mol=Genomic TTCTTAACAG AAAATCTCTA TGAAAGGAAA TTTGTGAAGT AGCAAGAGAA AAAGAAAAGC
ATGGTGAAGC TAGTATTTCA TTATACAGGT GTGATGGCAG GCACCCAGTT TTCTCATTTG
GTCATTTAAG TGAGCCTAAA CAAGTTGTCA GTATTCAGGG CTATAACTGT ACAGTTGGGT
ATTATGGCAA GTCCCGAATG
Y
CTAATTCAGG CTATCATAAG TGGACAGTCT AATAAAGTAC ATCTTAAAAT CATAAGAATA
TTTTTTTATA TTGCTTATAA GTTAGTTGAG GAAGGATTAG TCTTCAGTGT TGTTAATACT
GTTTGAAGGC AATTTTATCT AAtttttttt ttttgagacg gagtctcact ctattgccca
ggctggagtg cagtggcgtg atctcagctc actgcaacct ctgcttccca ggttcaattg
attctcctgc ctcagcctcc cgagtagttg ggattacaga cgtgcaccac catgcctggc
taatttttgt atttttagta gagatggggt tttgctatgt tggctatgct gatctcgtac
tcctgacctc aagtgatcca cccacctcag cctcccaaag tgctggaatt acaggtgtga
gccaccgcac ccTTGAATGT AAAAATATTT TATGAAGCTT AAGTTTCAAC TTTATAGTAA
ATATGAGTTG
There is no frequency submission for ss18135774.
No sufficient data to compute Hardy-weinberg probability for ss18135774.
There is no individual genotype data for ss18135774.
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