Submitted SNP(ss) Details: ss18135787

Submitted SNP(ss) Details: ss18135787

Submitter
Handle	SC_SNP
Submitter SNP ID	SC-CHR1_NA17109-200402.chr1.NT_021877.16_7659082
RefSNP(rs#)	rs11120248
Submitted Batch ID	SC-CHR1_NA17109-200402
Submitted Date	Feb 20, 2004
Publication Cited	[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP [2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNP	Feb 20 2004 12:00:00:000AM

Resource Links
GenBank Accession	NT_021877
Submitted Gene Name	N.D
Submitted Gene ID	N.D.
Submitted SNP Synonyms	N.D
Submitted linkout	N.D

Assay
Species	Homo sapiens
Molecular Type	Genomic
Method	CHR1_NA17109
Ascertainment Samplesize	2
Population	N.D.

Allele
Observed Allele	A/G
Ancestral Allele	N.D.
Allele Origin	N/A
SNP Class	SNV
CpG Code	c_g/a

Validation
Validation Status	Not Validated
HWE Goodness of Fit	not applicable

Variation
Frequency Submission	N.D.
Genotype Summary	N.D.
Genotype Submission	N.D.
Haplotype	N.D.

Comment
sequence position quality1SNP2-172h18.p1k -148 42

Fasta sequence (Legend)

 ATTAAGAGAC AAGAGCAGAG AAGCAGTGGG GCAGGGTTTG GGGCTGAATG TACCCTTCAC
 TGTCAGAGAG GAAACAAGAT TCTGGCCTGG ATGCATGCAT CCCCTTGTCT GGTTTGTGCT
 AGCCCATGGG CACTCTGCAC TGACCAGCTT GCCTCGGCTG TTGGAGACTC CACCTGAAGA
 AGGCAGGAGG GAGCAGTGGC
 R
 CAGTTACTGG CTTGGGCTAT GGAGTCAGAC AGACCTGCGT CTGAAGCCTA GTCCATGACT
 TGCTCACTTG TCAGTCTTCT TGAGTCATAG TTTGTTCTTT TATGAAATAA CACCTACCCC
 TCAAACTGAG TAATAAATGA GATGTGCTGT GGGAGGTACC TGGTATAATA GCATGTGCTT
 AGTAGAGGGT AGAGGAAGAA

Submitted Frequency for ss18135787

There is no frequency submission for ss18135787.

dbSNP summary of Genotypes for ss18135787

No sufficient data to compute Hardy-weinberg probability for ss18135787.

Submitted individual genotype for ss18135787

There is no individual genotype data for ss18135787.

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