Submitter | Handle | SC_SNP | Submitter SNP ID | SC-CHR1_NA17109-200402.chr1.NT_021937.16_3136003 | RefSNP(rs#) | rs10864372 | Submitted Batch ID | SC-CHR1_NA17109-200402 | Submitted Date | Feb 20, 2004 | Publication Cited | [1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP [2] SSAHA: A Fast Search Method for Large DNA Databases | First entry to dbSNP | Feb 20 2004 12:00:00:000AM |
| Resource Links | GenBank Accession | NT_021937
| Submitted Gene Name | N.D | Submitted Gene ID | N.D. | Submitted SNP Synonyms | N.D | Submitted linkout | N.D |
| Assay | Species | Homo sapiens | Molecular Type | Genomic | Method | CHR1_NA17109 | Ascertainment Samplesize | 3 | Population | N.D. |
| Allele | Observed Allele | T/A | Ancestral Allele | N.D. | Allele Origin | N/A | SNP Class | SNV | CpG Code | Unknown |
| | Variation | Frequency Submission | N.D. | Genotype Summary | N.D. | Genotype Submission | N.D. | Haplotype | N.D. |
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Comment | sequence position quality1SNP2-664l15.q1k -644 331SNP2-585i13.q1k 296 51 |
>gnl|dbSNP|ss18135795|allelePos=398|len=698|taxid=9606|alleles='T/A'|mol=Genomic TGGTGGGGGG TTCCTGCAGC ATGGGGAGGT GGGGGCTGTG TTCCTGTTGG GGGCATGGAA
GGACAACTGG GCCCTTGGGA GGAAATGAGG AAGAGGCCCC AGGAGCAGCA CAGGAAGAGC
AAAGCCAAGG ATCCCTCCAT GCATTCACCA GCTGGAAATA AGTCAAACGA GAGCAAAAAT
TTACGTATAA AACACTCTCA ggccgggcac ggtggctcac gcctgtaatc ccagcacttt
gggaggccaa ggtgggtgga tcacctgagg tcaggagtta gagatcagcc tggccaacat
ggtgaaaccc cgtctctact aaaaatacaa aaattagcca ggcgtggtgg tgcatgcctg
taatcccagc tactccggag gctgatgccg gataatc
W
cttgaatctg ggaggcagag gttgcagtga gccaagattg caccactgca ctccaacctg
ggtgacacag cgagaccctg tctcaaaaaa aaaaaaaaaa GACTTCCATT GATTTCAAAA
CACTGTCTTG CTCCCAGGGC CAGCAGTTGC CACAGGAAAG TTAGAGGTTA GCACCAAAGC
CCCCCAAACA CCAGAGTCCT TGGAGTTGAC CTCGTTGTCT TTTTGGCCTC CTTCTGGGGG
ACCTGCTTCT GCTTTCTGGA AGGTGCCTCC GTGGGTCCCC GCCCAGCAGG CCCTGGCCTC
There is no frequency submission for ss18135795.
No sufficient data to compute Hardy-weinberg probability for ss18135795.
There is no individual genotype data for ss18135795.
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