| Submitter | | Handle | SC_SNP | | Submitter SNP ID | SC-CHR1_NA17109-200402.chr1.NT_004836.15_1992286 | | RefSNP(rs#) | rs12057149 | | Submitted Batch ID | SC-CHR1_NA17109-200402 | | Submitted Date | Feb 20, 2004 | | Publication Cited | [1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases | | First entry to dbSNP | Feb 20 2004 12:00:00:000AM |
| | Resource Links | | GenBank Accession | NT_004836
| | Submitted Gene Name | N.D | | Submitted Gene ID | N.D. | | Submitted SNP Synonyms | N.D | | Submitted linkout | N.D |
| | Assay | | Species | Homo sapiens | Molecular
Type | Genomic | | Method | CHR1_NA17109 | | Ascertainment Samplesize | 2 | | Population | N.D. |
| | Allele | | Observed Allele | C/T | | Ancestral Allele | N.D. | | Allele Origin | N/A | | SNP Class | SNV | | CpG Code | c/t_g |
| | | Variation | | Frequency Submission | N.D. | | Genotype Summary | N.D. | | Genotype Submission | N.D. | | Haplotype | N.D. |
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| Comment | | sequence position qualityS1AA_3-289i04.p1k -356 56 |
>gnl|dbSNP|ss18135800|allelePos=501|len=1001|taxid=9606|alleles='C/T'|mol=Genomic ggggtccagc cactgtgtgt agccaggcat gctggctggg gtggggtggg ctgctccagg
tgctggcaca ggtgccagct ccatgtgagg ctgtggctgg atcagaccta ctgcaagtgg
cttctgctgt gggcaccagt atctggacaa ggagaatgca atggtgccaa aagctcagag
atgccaggaa ctgcagagcc ccaaggaggg tgttacagca tgtcacagcc ctggctcagg
gagcccccaa gggccactgc tcttctctcc ttgttgcctg caatgtggtg agtggggggc
atgtttccag cctgtttgtg ttacaactct ttcggtcctg ccaggtccca agttctagtc
cagcgtctgg gaagaatgag gtatgcagat aactggtggg tgagttagtc ggagaggagc
ttcattgagt aaaagaacaa ctctcatgag acctgaagtg ggcagctccc ttccgcaggc
aggtcttcct gacgagtgtg
Y
gagtccagct gagTCCAGGG TTTTGAtttt tgtttttttt tttgagacga agtcttgctc
ttgtccccca ggctggagtg caatggtgct atctcggctc actgcaacct ctgcctcctg
gattcaagcg attctcctgc ctcagcctcc tgagtagctg ggattacagg cacctgtcgc
catgcccggc taatttttct atttttagta gagacaaggt ttcactatgt tggccaggct
ggtctcgaac tcctgacctc aggtgatcca cctgcctcag cctctcaaag tgctgggatt
acaggaatga gccaccctgc ccggccgagt ccagggtttt tatgggctca gaggggagga
agtgcgtgct gatgggtcca cggtcggcca tggcaggcct ggaaaaaaca ctataaactc
ttactctgtg ttggggattc cactgggaac tggccccctg gcccccaggc ttcaggtcgt
gcctggcttg aaggtgaggC
There is no frequency submission for ss18135800.
No sufficient data to compute Hardy-weinberg probability for ss18135800.
There is no individual genotype data for ss18135800.
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