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Submitted SNP(ss) Details: ss18243001           
Submitter
HandleSC_SNP
Submitter SNP IDSC-CHR1_NA07340-200402.chr1.NT_004668.16_5449745
RefSNP(rs#)rs12116418
Submitted Batch IDSC-CHR1_NA07340-200402
Submitted DateFeb 20, 2004
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 20 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodCHR1_NA07340
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleT/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityS1C_2-426e17.p1k 511 42

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss18243001|allelePos=201|len=438|taxid=9606|alleles='T/A'|mol=Genomic
 CCTTTATTCC AGCCAGGCTT TTCACAAGAC TCACAGCATT ACAAACTCAG GATAAGACCG
 AAGGAGAACC GTTTTATGGA GGGGAAATGC ATTCGAAAGA ACAACCTCAG CGCCAATGAG
 TCAAACACCT GCATCTAGAT GCGTCTCACT TGTCATTGGG CTTCTCCCCC GCCGCCCCCA
 TCATTCTCTC TCTCTCTCTc
 W
 cacacacaca cacacaaaca catacacaaa cacacacGTT GCCCCCTCCC CCACTTTCCA
 CCAGACCGCT AAGCAGCTTT AAACATGGTC AGTAAGGAGG AAAATGGGGG GGCGGGGGGC
 GCGGTGAGAA CAGAACCACT ACAGGAATAT ACAAAGTTAT TCGTTTCTGT TGAAAAGGAC
 TCTTACCTGT TAGCCAGAAG AGAGAAATCC ACCTCAGCAA GACCCTATCC ATCTTCC

  Submitted Frequency for ss18243001 back to top
There is no frequency submission for ss18243001.


  dbSNP summary of Genotypes for ss18243001 back to top
No sufficient data to compute Hardy-weinberg probability for ss18243001.


  Submitted individual genotype for ss18243001 back to top
There is no individual genotype data for ss18243001.

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