| Submitter | | Handle | SC_SNP | | Submitter SNP ID | SC-CHR1_NA07340-200402.chr1.NT_004547.16_537883 | | RefSNP(rs#) | rs12116421 | | Submitted Batch ID | SC-CHR1_NA07340-200402 | | Submitted Date | Feb 20, 2004 | | Publication Cited | [1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases | | First entry to dbSNP | Feb 20 2004 12:00:00:000AM |
| | Resource Links | | GenBank Accession | NT_004547
| | Submitted Gene Name | N.D | | Submitted Gene ID | N.D. | | Submitted SNP Synonyms | N.D | | Submitted linkout | N.D |
| | Assay | | Species | Homo sapiens | Molecular
Type | Genomic | | Method | CHR1_NA07340 | | Ascertainment Samplesize | 2 | | Population | N.D. |
| | Allele | | Observed Allele | T/A | | Ancestral Allele | N.D. | | Allele Origin | N/A | | SNP Class | SNV | | CpG Code | Unknown |
| | | Variation | | Frequency Submission | N.D. | | Genotype Summary | N.D. | | Genotype Submission | N.D. | | Haplotype | N.D. |
|
| Comment | | sequence position qualityS1C_2-1000d08.q1k 137 37 |
>gnl|dbSNP|ss18243004|allelePos=501|len=734|taxid=9606|alleles='T/A'|mol=Genomic CTTGGGTCTC TGTTCCTGAA ATTCCCTCCT GGATTCGTGA CCACGGAGAA ACTTGGCTAA
GACCATGAGT GGGCTAAGAC GCTGattcgt ttgctcaagt tgtcataaca aactaccgtt
tactgggtag tttaaacaga aatttccgtt ctcactgtcc tggaggctgg aagtctgaga
tcaaggcatt ggcagggttg gtttctcctt ggcctgtgtg gccatcttct ccctgtgtat
tctcacaatc atgcttctgt gtgtgtctgt gtcctagtct cctcttctta taaggacacc
agtcctattg gatcacagcc catcctaaca acctcattgt aacttaatca cctttgtaaa
gatctcattt gcaaacagcc atattctgag atactgaggt taggacttcc acacatgaat
ttggaaggga ggttggcata attcagtcca taacaGACAT AGTCTCCTCT CCTGGAAAAA
GTAAATTAGT AAACACTGCA
W
CCTTCTCTCC TTAGACTAGA AAACACACTT ACAGTGTGGG GATGGAGCCT GCAGGGTAGG
GTGGGAGGGT GTTATTTTAG GGAGTTAGGA ACAGGGGGAC TCACATCACT CCTGGTGATG
ACAAAGTGAA GGCTATGAAA GCTAGGTTTC TGGTTGACAA GAAGCAGACT TCTACCTCCA
GTCTCTGGGT TGTGTAAGGt tttttttttt ttttttttaa aaactttatt ttG
There is no frequency submission for ss18243004.
No sufficient data to compute Hardy-weinberg probability for ss18243004.
There is no individual genotype data for ss18243004.
| 
