| Submitter | | Handle | SC_SNP | | Submitter SNP ID | SC-CHR1_NA07340-200402.chr1.NT_026943.13_4191132 | | RefSNP(rs#) | rs12116422 | | Submitted Batch ID | SC-CHR1_NA07340-200402 | | Submitted Date | Feb 20, 2004 | | Publication Cited | [1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases | | First entry to dbSNP | Feb 20 2004 12:00:00:000AM |
| | Resource Links | | GenBank Accession | NT_026943
| | Submitted Gene Name | N.D | | Submitted Gene ID | N.D. | | Submitted SNP Synonyms | N.D | | Submitted linkout | N.D |
| | Assay | | Species | Homo sapiens | Molecular
Type | Genomic | | Method | CHR1_NA07340 | | Ascertainment Samplesize | 2 | | Population | N.D. |
| | Allele | | Observed Allele | G/A | | Ancestral Allele | N.D. | | Allele Origin | N/A | | SNP Class | SNV | | CpG Code | Unknown |
| | | Variation | | Frequency Submission | N.D. | | Genotype Summary | population count: 4 | | Genotype Submission | N.D. | | Haplotype | N.D. |
|
| Comment | | sequence position qualityS1C_2-676c21.q1k 465 30 |
>gnl|dbSNP|ss18243006|allelePos=201|len=698|taxid=9606|alleles='G/A'|mol=Genomic GTCTGTCTTT ATTTTTGGCC AATATGTTCT TAATATAGAG GAGGGAAATA TTTTCCACTT
TCAGGACTTT CTTCTAAAGT GATATCAGCA AAATAATTAC TGAAATGGAT ATAATTCAAG
AGTAAGTTGA GCATTTATCA TTTGTGTAAA CAATTCCTCA TTTCTGTTGA AACTTCTCTG
GGGTAGAATT GTAATTTGTA
R
ATCATAAACC TGGCTAACTT CAATAAGTTT ATAGAAAGAA AGAAATAACT ATATTGCAAA
GGGTGACCCA TAAAGTACCC AGAATATAAG AAGACATATT CATAATTAAT CCATTATGAA
ATTCTGGGAA TTTTATGAGA GCAGATAGCT ACCTTTTCTT ACATTTCTCT AGTATACAGC
TGGGATTAGT AAACATTTTG TGTAGAGGTC CAGAAAATAA CAATTTGAGG TTTTGAGACA
CCTGTGGCCT TGATCAcaac tatgccatac cattaaagca gagaatacaa aaacaaacaa
atgagtgtgg ctgtatccca ataaaactat ttacaaaaac aagcCATGCT CATTGATGAC
TCCTGATCTA GAATCCGAGG TCCACAAGGA CAAAGACTAT TTTCTATTTT ATTTGGTGAT
GTATTCTCAA GGCCTAGAAC AGTGTTTGGA ATATACAAGA TGCTCAACAA TCATTTGTTG
AATAAATAAA AGGGTGA
There is no frequency submission for ss18243006.
No sufficient data to compute Hardy-weinberg probability for ss18243006.
There is no individual genotype data for ss18243006.
| 
