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Submitted SNP(ss) Details: ss18243013           
Submitter
HandleSC_SNP
Submitter SNP IDSC-CHR1_NA07340-200402.chr1.NT_032962.5_2677652
RefSNP(rs#)rs12116427
Submitted Batch IDSC-CHR1_NA07340-200402
Submitted DateFeb 20, 2004
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 20 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR1_NA07340
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleT/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityS1C_2-488l24.q1k -175 40

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss18243013|allelePos=201|len=401|taxid=9606|alleles='T/A'|mol=Genomic
 ACCTGAGCCA GACCCATGTC GGCCACTGCT GGAAGACCAA CCGGAGCCAG ACCCATGTTG
 GCCGTAGCTG GAAGAGTGCC CGGAACCGGA CCCATGTCGG CCGCGACTAG GAGACTGGCC
 AGATCCAGAG CCCTGTTGGC CATAGCTAGA AGACTGACTT GAGCCAGAGC CATGCTGACC
 GTGGCTGGAA GACTGACCTG
 W
 GCTAGATCCC TCCTGGTCAA AGGTTGATGA CTGTCCTGAT GTAGAACCAT GCTGTCCTTG
 GCTACAGAAG TGCCCTGAGC CACTACCATG CTGACTGTAA GCAGAGGAAT GTCCTGAGCC
 AGACTCATGT TGACCAAAGA CAGAAGAGTG ACCCGAGCGA GACTCATATG GGCCACGGCT
 GGAAGAACGA CCTGAGCCAG

  Submitted Frequency for ss18243013 back to top
There is no frequency submission for ss18243013.


  dbSNP summary of Genotypes for ss18243013 back to top
No sufficient data to compute Hardy-weinberg probability for ss18243013.


  Submitted individual genotype for ss18243013 back to top
There is no individual genotype data for ss18243013.

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