Submitted SNP(ss) Details: ss18243025

Submitted SNP(ss) Details: ss18243025

Submitter
Handle	SC_SNP
Submitter SNP ID	SC-CHR1_NA07340-200402.chr1.NT_032962.5_2677694
RefSNP(rs#)	rs12116435
Submitted Batch ID	SC-CHR1_NA07340-200402
Submitted Date	Feb 20, 2004
Publication Cited	[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP [2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNP	Feb 20 2004 12:00:00:000AM

Resource Links
GenBank Accession	NT_032962
Submitted Gene Name	N.D
Submitted Gene ID	N.D.
Submitted SNP Synonyms	N.D
Submitted linkout	N.D

Assay
Species	Homo sapiens
Molecular Type	Genomic
Method	CHR1_NA07340
Ascertainment Samplesize	2
Population	N.D.

Allele
Observed Allele	T/C
Ancestral Allele	N.D.
Allele Origin	N/A
SNP Class	SNV
CpG Code	Unknown

Validation
Validation Status	Not Validated
HWE Goodness of Fit	not applicable

Variation
Frequency Submission	N.D.
Genotype Summary	N.D.
Genotype Submission	N.D.
Haplotype	N.D.

Comment
sequence position qualityS1C_2-488l24.q1k -133 40

Fasta sequence (Legend)

 GGAGCCAGAC CCATGTTGGC CGTAGCTGGA AGAGTGCCCG GAACCGGACC CATGTCGGCC
 GCGACTAGGA GACTGGCCAG ATCCAGAGCC CTGTTGGCCA TAGCTAGAAG ACTGACTTGA
 GCCAGAGCCA TGCTGACCGT GGCTGGAAGA CTGACCTGTG CTAGATCCCT CCTGGTCAAA
 GGTTGATGAC TGTCCTGATG
 Y
 AGAACCATGC TGTCCTTGGC TACAGAAGTG CCCTGAGCCA CTACCATGCT GACTGTAAGC
 AGAGGAATGT CCTGAGCCAG ACTCATGTTG ACCAAAGACA GAAGAGTGAC CCGAGCGAGA
 CTCATATGGG CCACGGCTGG AAGAACGACC TGAGCCAGAC CCATGTTGGC CGTGGCTGGA
 GGAGTGCCCC GAACCGGACC

Submitted Frequency for ss18243025

There is no frequency submission for ss18243025.

dbSNP summary of Genotypes for ss18243025

No sufficient data to compute Hardy-weinberg probability for ss18243025.

Submitted individual genotype for ss18243025

There is no individual genotype data for ss18243025.

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