Submitted SNP(ss) Details: ss18243027

Submitted SNP(ss) Details: ss18243027

Submitter
Handle	SC_SNP
Submitter SNP ID	SC-CHR1_NA07340-200402.chr1.NT_021877.16_3355824
RefSNP(rs#)	rs12116437
Submitted Batch ID	SC-CHR1_NA07340-200402
Submitted Date	Feb 20, 2004
Publication Cited	[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP [2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNP	Feb 20 2004 12:00:00:000AM

Resource Links
GenBank Accession	NT_021877
Submitted Gene Name	N.D
Submitted Gene ID	N.D.
Submitted SNP Synonyms	N.D
Submitted linkout	N.D

Assay
Species	Homo sapiens
Molecular Type	Genomic
Method	CHR1_NA07340
Ascertainment Samplesize	2
Population	N.D.

Allele
Observed Allele	G/A
Ancestral Allele	N.D.
Allele Origin	N/A
SNP Class	SNV
CpG Code	Unknown

Validation
Validation Status	Not Validated
HWE Goodness of Fit	not applicable

Variation
Frequency Submission	N.D.
Genotype Summary	N.D.
Genotype Submission	N.D.
Haplotype	N.D.

Comment
sequence position qualityS1C_2-926l06.p1k 93 45

Fasta sequence (Legend)

 CCTCCCTGAG CCTGGACATG AGCTAGGGCA GATGGCAACA CTTTTCTGGT TACTCCAGGT
 TAATAAAAAA TCCTATGGCT GCCTCTAGTC CACAGAACAG TCTCATTTCC AAATAGGTAA
 GATGTCTAGT CATGTGCAAT TTAACTTTTA CCAAAGCTTC TCCCCTTGCT AAGCTGGAAC
 CTGCTGTTGG TAGGAAATGT
 R
 TTTGTTCTTT CCTCTCTTTC CCCACCTCCT CCCCACTCCC TGACCCCCTC TAGCCTGTCT
 TGGGTTAAAG GAAAAGGGAC AATGCAGGGA AGAGGATAAG GAGTAGGAAA GGTCTTATTT
 GGCTGGCACC CAGCTAATAT ATTGGTCTTC TCTTGACATT CAGAACTCAT GCTCTCTGAC
 CATTTGGTGG ATGATCAAAT

Submitted Frequency for ss18243027

There is no frequency submission for ss18243027.

dbSNP summary of Genotypes for ss18243027

No sufficient data to compute Hardy-weinberg probability for ss18243027.

Submitted individual genotype for ss18243027

There is no individual genotype data for ss18243027.

Disclaimer Privacy statement