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Submitted SNP(ss) Details: ss18317673           
Submitter
HandleSC_SNP
Submitter SNP IDSC-CHR22_NA10470-200402.chr1.NT_022052.2_51572
RefSNP(rs#)rs749537564
Submitted Batch IDSC-CHR22_NA10470-200402
Submitted DateFeb 20, 2004
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 20 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR22_NA10470
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleA/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality22SNP10470-252g16.p1k 97 46

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss18317673|allelePos=501|len=1001|taxid=9606|alleles='A/T'|mol=Genomic
 agaacactgt tacgagggcc tcaatgttgg tccctcacat aggattccag aacactgcta
 cgaaggtctg aatgtttctc cctcacatag gattccagaa cactgctaca aggttctgaa
 tgtttgtccc tcacttaaga ttctagaaaa ctgctacgag ggtctaaatg tttgtccctc
 acataggatt ccagaacagt cgtgttgtct tttgaaactt tgtccctcac ataggattcc
 agaacactgc tacgagggtc tgaatgtttc tccctcacag aggattccag aacactccag
 ctcgggtctg aaagtttgtc cctcacttag gTttccagaa cactgctgct gtggtctgta
 tgtttgtccc tcacaaagga ttccagaaca gtcctgctgt ggtctgattg tttgttcttc
 acataggatt ccagaacact gctgcgaggc tctgaatgtc cctgacatag gaatccagaa
 cactgctgcc gttgtctgaa
 W
 ctttgtcctt cacataggat tccagaagcc ttctgctggt gtctgaatgt ttttccctca
 tctaggattc ctgaacactg ctgcgagggt ctgaatgtat gtccctcaca tacgattcca
 gaacactgat gctggagtct gaatgtttgc ccttaacata ggatttcaga acactgctcc
 tggggtctgt ttgtaccaca cataggaCTA cacaaaactg ctgctggagt ctgaatgttt
 gtcactccca tagaatttga gacaactgct gcgagggtcc aaatgtttgt ccctcacatg
 ggattctaga atactgctgc gagagtctaa atgtctgtcc ctcacataag attccagcac
 actgttatga ggttctgaat gtttgtccct cacttaggtt tccagaacac tgctgctgtg
 gtctgaatgt ttgtccctcc cataggattc cagaacactg ctacgagggt ctgaatgttt
 gtccctcaca taggaTTCCA

  Submitted Frequency for ss18317673 back to top
There is no frequency submission for ss18317673.


  dbSNP summary of Genotypes for ss18317673 back to top
No sufficient data to compute Hardy-weinberg probability for ss18317673.


  Submitted individual genotype for ss18317673 back to top
There is no individual genotype data for ss18317673.

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