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Submitted SNP(ss) Details: ss18323078           
Submitter
HandleSC_SNP
Submitter SNP IDSC-CHR22_NA11321-200402.chr1.NT_077930.1_78928
RefSNP(rs#)rs4094731
Submitted Batch IDSC-CHR22_NA11321-200402
Submitted DateFeb 20, 2004
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 20 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR22_NA11321
Ascertainment Samplesize6
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG Codec/t_g
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality22SNP11321-404d06.p1k -522 2922SNP11321-327c02.p1k 520 4322SNP11321-233j01.q1k -617 3722SNP11321-404d06.q1k -524 2522SNP11321-203h21.q1k -609 56

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss18323078|allelePos=501|len=1001|taxid=9606|alleles='C/T'|mol=Genomic
 ACAAGTCTAA TGTAGACAGT AAAATTAATA GGCTAAAAAT TAAACTCCAT CAAACAAGAT
 GAACTCTGAG AGAATAGATg gggcaggccg ccatctttcc ggttcaggca acttagtcat
 tccagcctga gggctttgga gagtataaac cgacaagggg cagaagagat cccacagcac
 agcatagctg ctttaccaaa tcatggccag aatgcttctg taagcaggcc cccgaccctg
 ttgcacatca ctgtacagga cctcccaaat ggggcctcca gctaccgcca ccagcattcc
 ttggccaata gaaatttgaa gtgttcacgg gacagagctc ccagagagag gggcaggcca
 ccacctttgc tgtttgggtg actagccgtt ctggtttgcg ggctttggaa agcccaaggt
 gacaaggggt ggaagaggaa cctcagcgca gcacggccac actacaaaaa cgtggccaga
 ctcttgttta agtcagtccc
 Y
 gaccacattt ctaatcagca ggtgaagcct ttcaaccagg gtctccagct gccttcactg
 ctgttctctg gccgacagag gtttcaggcc tccctgagtc agagctccca gggggaggac
 cagactgttg tctttgctgt tggggcaact cagccatttc agcattaggg cttcagagtg
 tctgaggcaa ccaggagtgg aagggaacac ccggcatagc acagctgctc tagaaaaaca
 tgcccagact tttttttttt taactcagtg cctgtttttg ttcctcctga ctagataaga
 cttctcaact tgtctccagt cacatcttat aggtgtgttc atactggcaa caagttcata
 cctcagtggc acagagctcc cagaggaagg ggcaggctat catcttccct ggaaaataca
 aggcagttag ggactggagg ggacccccag cataccacag cagcctgaca gaaaagtggc
 cagacagtct acttgATGGG

  Submitted Frequency for ss18323078 back to top
There is no frequency submission for ss18323078.


  dbSNP summary of Genotypes for ss18323078 back to top
No sufficient data to compute Hardy-weinberg probability for ss18323078.


  Submitted individual genotype for ss18323078 back to top
There is no individual genotype data for ss18323078.

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