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Submitted SNP(ss) Details: ss18323104           
Submitter
HandleSC_SNP
Submitter SNP IDSC-CHR22_NA11321-200402.chr1.NT_077930.1_79477
RefSNP(rs#)rs12161176
Submitted Batch IDSC-CHR22_NA11321-200402
Submitted DateFeb 20, 2004
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 20 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR22_NA11321
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality22SNP11321-306g05.q1k 407 45

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss18323104|allelePos=501|len=1001|taxid=9606|alleles='C/T'|mol=Genomic
 CTgccttcac tgctgttctc tggccgacag aggtttcagg cctccctgag tcagagctcc
 cagggggagg accagactgt tgtctttgct gttggggcaa ctcagccatt tcagcattag
 ggcttcagag tgtctgaggc aaccaggagt ggaagggaac acccggcata gcacagctgc
 tctagaaaaa catgcccaga cttttttttt tttaactcag tgcctgtttt tgttcctcct
 gactagataa gacttctcaa cttgtctcca gtcacatctt ataggtgtgt tcatactggc
 aacaagttca tacctcagtg gcacagagct cccagaggaa ggggcaggct atcatcttcc
 ctggaaaata caaggcagtt agggactgga ggggaccccc agcataccac agcagcctga
 cagaaaagtg gccagacagt ctacttgatg ggcaggtcct actgacctgg gtctccagcc
 agtccaccat cagagctatc
 Y
 agccagtagc aactcagcaa ttccctggac agagcttcca ggagcaaacg aaattctctc
 tgccattgcc tccgcagtga aactgccctt gctaccctca gaatatcaag ggagcaaaga
 ccctaagtgc catattgaca cctccaataa gctgcggttg acccaatgaa caagccagtc
 catctcccac gggtaccaca caccccccac tgctcatcac cagagaggga acactggctt
 ggcctcacaa cacagaccct ccatcctggg ctgattactc taagtgattg ctaactcaca
 tctctatggg atggagtacc caggagacaa gcGGAGTGGT GGAGCAGCAA GTCAGGTGAT
 GTGGAGCCCA GAGAGCAGGG ACACCTATCT CTCTAGGCTC CACGTGCCCT TGTGAGATAC
 TTTATCCCAG CACTTTAGGA ATGCTAAGTT CAGATCAGCC CCATCTCATG TTCAAGATTG
 CCCAGCAGAG ATCAGGTCCC

  Submitted Frequency for ss18323104 back to top
There is no frequency submission for ss18323104.


  dbSNP summary of Genotypes for ss18323104 back to top
No sufficient data to compute Hardy-weinberg probability for ss18323104.


  Submitted individual genotype for ss18323104 back to top
There is no individual genotype data for ss18323104.

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