Submitter | Handle | SC_SNP | Submitter SNP ID | SC-CHR22_NA11321-200402.chr1.NT_077930.1_79477 | RefSNP(rs#) | rs12161176 | Submitted Batch ID | SC-CHR22_NA11321-200402 | Submitted Date | Feb 20, 2004 | Publication Cited | [1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP [2] SSAHA: A Fast Search Method for Large DNA Databases | First entry to dbSNP | Feb 20 2004 12:00:00:000AM |
| Resource Links | GenBank Accession | NT_077930
| Submitted Gene Name | N.D | Submitted Gene ID | N.D. | Submitted SNP Synonyms | N.D | Submitted linkout | N.D |
| Assay | Species | Homo sapiens | Molecular Type | Genomic | Method | CHR22_NA11321 | Ascertainment Samplesize | 2 | Population | N.D. |
| Allele | Observed Allele | C/T | Ancestral Allele | N.D. | Allele Origin | N/A | SNP Class | SNV | CpG Code | Unknown |
| | Variation | Frequency Submission | N.D. | Genotype Summary | N.D. | Genotype Submission | N.D. | Haplotype | N.D. |
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Comment | sequence position quality22SNP11321-306g05.q1k 407 45 |
>gnl|dbSNP|ss18323104|allelePos=501|len=1001|taxid=9606|alleles='C/T'|mol=Genomic CTgccttcac tgctgttctc tggccgacag aggtttcagg cctccctgag tcagagctcc
cagggggagg accagactgt tgtctttgct gttggggcaa ctcagccatt tcagcattag
ggcttcagag tgtctgaggc aaccaggagt ggaagggaac acccggcata gcacagctgc
tctagaaaaa catgcccaga cttttttttt tttaactcag tgcctgtttt tgttcctcct
gactagataa gacttctcaa cttgtctcca gtcacatctt ataggtgtgt tcatactggc
aacaagttca tacctcagtg gcacagagct cccagaggaa ggggcaggct atcatcttcc
ctggaaaata caaggcagtt agggactgga ggggaccccc agcataccac agcagcctga
cagaaaagtg gccagacagt ctacttgatg ggcaggtcct actgacctgg gtctccagcc
agtccaccat cagagctatc
Y
agccagtagc aactcagcaa ttccctggac agagcttcca ggagcaaacg aaattctctc
tgccattgcc tccgcagtga aactgccctt gctaccctca gaatatcaag ggagcaaaga
ccctaagtgc catattgaca cctccaataa gctgcggttg acccaatgaa caagccagtc
catctcccac gggtaccaca caccccccac tgctcatcac cagagaggga acactggctt
ggcctcacaa cacagaccct ccatcctggg ctgattactc taagtgattg ctaactcaca
tctctatggg atggagtacc caggagacaa gcGGAGTGGT GGAGCAGCAA GTCAGGTGAT
GTGGAGCCCA GAGAGCAGGG ACACCTATCT CTCTAGGCTC CACGTGCCCT TGTGAGATAC
TTTATCCCAG CACTTTAGGA ATGCTAAGTT CAGATCAGCC CCATCTCATG TTCAAGATTG
CCCAGCAGAG ATCAGGTCCC
There is no frequency submission for ss18323104.
No sufficient data to compute Hardy-weinberg probability for ss18323104.
There is no individual genotype data for ss18323104.
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