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Submitted SNP(ss) Details: ss18328019           
Submitter
HandleSC_SNP
Submitter SNP IDSC-CHR6_NA17119-200402.chr1.NT_077988.2_26633
RefSNP(rs#)rs878999889
Submitted Batch IDSC-CHR22_NA17119-200402
Submitted DateFeb 20, 2004
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 20 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR22_NA17119
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleA/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality22S17119-300m15.q1k 465 5622S17_2-79c21.q1k 358 5122S17_2-79a15.q1k 362 51

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss18328019|allelePos=501|len=1001|taxid=9606|alleles='A/C'|mol=Genomic
 gttggcttca tccctgggat gcaaggctgg ttcaacatgc aaatcaataa atgtaatcca
 tcacataaac ggaatcaatg acaaaaacta catgattatc tcaatagatg cagaaaaggc
 ctttgacaaa attcaacagc ccttcatgct aaaaactctc aataaactgg tattgatgga
 acgtatctca aaatattaag tgctatttat ggcaaaccca cagccaataa catactgaat
 gtgcaaaaac tggaagcatt ccctttgaaa atcagcacaa gacaaggatg ccctctctca
 ctactcctat tccacatagt gttggaagtt ctggccaggg taatcaggca agagaaagaa
 atacatggtg ttcaattagg aaaagaagaa gtcaaattgt ctctgtttgc agatgacatg
 attatatatt tagaaaaccc catcgtctca gcccaaaatc tccttaagct gataagcaac
 ttcagcaaag ttttaggata
 M
 aaaattaatg tgcaaaaatc acaagctttc ttatacacca ataacagaca aacagagagc
 caaactatga gtgaactccc attctccatt gctacaacaa gaatgaaata cctaggaata
 caacttacaa ggatgtgaag gacctcttca aggagaacta taaaccactc ctcaaggaaa
 caagagagga caaaaacaaa tggaaaaaca ttccatgctc atcaatagga agaatcaata
 tcgtgaaaat ggccatacta cccaaagtaa tttatagatt cactgctatc cccattaaac
 tctattgact ttctccacag aattggaaaa atatatttta aatttcatac ggaatcaaaa
 agagcccgaa tagccaagac aatcctaagc aaaaagaaca aagcttcaag catcatgcta
 cctgacttca aactatacta caaggctacg ataaacaaaa gaacatggta ctggtaccaa
 aacagatata tagatcaaAG

  Submitted Frequency for ss18328019 back to top
There is no frequency submission for ss18328019.


  dbSNP summary of Genotypes for ss18328019 back to top
No sufficient data to compute Hardy-weinberg probability for ss18328019.


  Submitted individual genotype for ss18328019 back to top
There is no individual genotype data for ss18328019.

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