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Submitted SNP(ss) Details: ss18328022           
Submitter
HandleSC_SNP
Submitter SNP IDSC-CHR6_NA17119-200402.chr1.NT_077387.2_9912
RefSNP(rs#)rs11249338
Submitted Batch IDSC-CHR22_NA17119-200402
Submitted DateFeb 20, 2004
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 20 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR22_NA17119
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleA/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality22SNP17119-63l09.q1k 537 27

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss18328022|allelePos=201|len=517|taxid=9606|alleles='A/C'|mol=Genomic
 TAAAATCAAA GTAATTTTGT TATAAGTTTT TTGACACCAG ATTATGTGGG GTAAATAATT
 TACTTTCTAA TCAAGCAATT GATACATATA AACCTGAAAT AGAGAGTTTT GCCTTTTAAT
 TAGATACATT GTTACGCAAA GAGTAGTTGA AGCTGCAGTT GAGAATTATC TTTTTCTCTT
 TTTGCTGTTC TTACAAGGAC
 M
 GTTTCTAGAA TTGTTTTCAA AACAATAGAA CAGAAAATTT CACTTACTCA CTTAATTTAA
 CTTTTGTTAA AGTACTTTGC CAAAATTAGG AAACTATGAA AGGAAAGTTT GCCTTTTCAA
 TATATATGTA AGTGGCAAGT AAAAGTTGTT CTTAAATCAC GTGATCTCAT AGAAATAACA
 TGGGATAAAA AGAGTTCTGA AGGTGTTCAG GAAATGCCAG TCCTAAATGG ATTGCTTTGG
 TGTACTGATT ACATTGAACT GAAAATATTT GAAAAATAAC AACTGTGGAA CATGCTTTCT
 CTGCACTCCC TTTACG

  Submitted Frequency for ss18328022 back to top
There is no frequency submission for ss18328022.


  dbSNP summary of Genotypes for ss18328022 back to top
No sufficient data to compute Hardy-weinberg probability for ss18328022.


  Submitted individual genotype for ss18328022 back to top
There is no individual genotype data for ss18328022.

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