Submitter | Handle | SC_SNP | Submitter SNP ID | SC-CHR6_NA17119-200402.chr1.NT_077988.2_155208 | RefSNP(rs#) | rs12164483 | Submitted Batch ID | SC-CHR22_NA17119-200402 | Submitted Date | Feb 20, 2004 | Publication Cited | [1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP [2] SSAHA: A Fast Search Method for Large DNA Databases | First entry to dbSNP | Feb 20 2004 12:00:00:000AM |
| Resource Links | GenBank Accession | NT_077988
| Submitted Gene Name | N.D | Submitted Gene ID | N.D. | Submitted SNP Synonyms | N.D | Submitted linkout | N.D |
| Assay | Species | Homo sapiens | Molecular Type | Genomic | Method | CHR22_NA17119 | Ascertainment Samplesize | 2 | Population | N.D. |
| Allele | Observed Allele | C/T | Ancestral Allele | N.D. | Allele Origin | N/A | SNP Class | SNV | CpG Code | Unknown |
| | Variation | Frequency Submission | N.D. | Genotype Summary | N.D. | Genotype Submission | N.D. | Haplotype | N.D. |
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Comment | sequence position quality22SNP17119-106d12.p1k -382 35 |
>gnl|dbSNP|ss18328023|allelePos=501|len=701|taxid=9606|alleles='C/T'|mol=Genomic CTTTCACTCC TGAGCTATAT GCAATGGTTG AAATCTCTGC TCTGTGCTAG TAATTTAGCT
GTTGTTTTCT GCTGGATTCT ATGGAGTCTC CTTTTATGAA TGTGAAATGT AGCAGCCATC
ATATATCTGA ATGAAGTTGA AGTGCTGATT TTAGATTTTT ACTCTGTGAT ATTCTCCTCT
GTGACTTTCA GTTGTGTGAG ATTTCCTCCC ATGTCATTCA AATTTCCCAG TTCCTCTTTT
CTGTCAGCCT GGAACTCTGT GCTCTTATTC CTCAAGCTAG TAAAACTCAC CGCTTTACTC
GTAGACATCT AATTTTGCAC AGACTGGGAA GCGTCATCAG GTGTGAAGTT GCATTGATGC
AAATTTAAAT CATTGCAATT TTCTTTATTC TGTGGTCAAA TACTTCATCA TTAGTGGAGT
ATTCTACTAT TTCTGCCTCT TTTCTGTTTC TCATTACCAT CAAAGTGTAT TTAATTTTTT
TAGAGTTAAT AGTTTTTTCC
Y
TGCATTTGGT TTAGACCTGA GCTACTACCA TATTTTGTAA TTCAAACTTT TTGTCTAACA
ATGTTTTAGA AAACTCTTTA TTTGGAGGGA ATTCTCAAAC TTCTAAATAC TCTACAAACA
TTAGGATCAG GGCTCACATT CCCAGTTTCC CTTGTAGCCA GATGTACATA TGGAACATGG
CCTCAGCTAA TGAAGCATAC
There is no frequency submission for ss18328023.
No sufficient data to compute Hardy-weinberg probability for ss18328023.
There is no individual genotype data for ss18328023.
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