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Submitted SNP(ss) Details: ss18337302           
Submitter
HandleSC_SNP
Submitter SNP IDSC-CHR22_NA07340-200402.chr1.NT_022052.2_43773
RefSNP(rs#)clustering in process
Submitted Batch IDSC-CHR22_NA07340-200402
Submitted DateFeb 20, 2004
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 20 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR22_NA07340
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleG/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality22S732-439m22.p1k -188 51

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss18337302|allelePos=501|len=1001|taxid=9606|alleles='G/T'|mol=Genomic
 GGAttccaga acacagcaaa gagggtctga atatttgtcc ctcacttagg attccagaat
 gctgctgctg ggttctgagt gtttgtccca cacataggat tccagaacac tgctacaagg
 gtctgaatgt ttgtccatta aatgatattc cagagaactg ctgctggggt ctcaatgttt
 gtccctcaGA CTGCAttcca gaacactcct gctgtggtct gaatatttac ccctcaaata
 ggattccata acactgctgc tgtggtctga ctgtccctca cataggattc cagaacaatt
 ctgctacgat ctgaatgttt gtccctcaca tagcattcca gaagactgct gctgtggact
 gaatgttttt ccctgacgta ggattccaga acacttctcc tggattctga gttttttttc
 cctcaaatag gattccagaa cactcctgct gttttctgaa tatttgttcc tcacataCGT
 Ctccataaca ctcctgctgt
 K
 gttaggatgt ttgtccctca gatagcattc aggaacactg ctgctggagt ctgaatgttt
 gtctctaaca tacaattcca cagcactact gctctggtct gaaggttttt ccttcacata
 tgatttcaga acactggtgc tggattctga gcgattgtca ttcacataag attccagaac
 actgctaaga gggtctgaat atttgtccct tacttaggat tccagaatac tgcttctggg
 ttctgagtgt ttgtcccaca cataggattc cagaacactg ctacaagggt ctgaatgttt
 gtccattaaa tGATAttcca gagcactgct aatggggtct caatgtttgt ccctcagaca
 gcattccaga acactcctgc tgtggtctga atatctgtcc ctcacatagg attccataac
 actgctgctg tggtctgact gtttgtccct cacataggat tccagaacaa ttctgctacg
 atctgaatgt ttgtccctca

  Submitted Frequency for ss18337302 back to top
There is no frequency submission for ss18337302.


  dbSNP summary of Genotypes for ss18337302 back to top
No sufficient data to compute Hardy-weinberg probability for ss18337302.


  Submitted individual genotype for ss18337302 back to top
There is no individual genotype data for ss18337302.

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