Submitter | Handle | SC_SNP | Submitter SNP ID | SC-CHR6_NA11321-200402.chr1.NT_077389.2_384922 | RefSNP(rs#) | rs11249417 | Submitted Batch ID | SC-CHR6_NA11321-200402 | Submitted Date | Feb 20, 2004 | Publication Cited | [1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP [2] SSAHA: A Fast Search Method for Large DNA Databases | First entry to dbSNP | Feb 20 2004 12:00:00:000AM |
| Resource Links | GenBank Accession | NT_077389
| Submitted Gene Name | N.D | Submitted Gene ID | N.D. | Submitted SNP Synonyms | N.D | Submitted linkout | N.D |
| Assay | Species | Homo sapiens | Molecular Type | Genomic | Method | CHR6_NA11321 | Ascertainment Samplesize | 2 | Population | N.D. |
| Allele | Observed Allele | G/T | Ancestral Allele | N.D. | Allele Origin | N/A | SNP Class | SNV | CpG Code | Unknown |
| | Variation | Frequency Submission | N.D. | Genotype Summary | N.D. | Genotype Submission | N.D. | Haplotype | N.D. |
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Comment | sequence position qualityS6A_3-69o10.q1k -141 35 |
>gnl|dbSNP|ss18339034|allelePos=299|len=540|taxid=9606|alleles='G/T'|mol=Genomic CTACCCTGGT TCCCAGAAAG CCAAAAGTAA GTGTCAGTTT CTCCCTCTAG GCAGTCTCTA
GATTTAAGGG TTCCTTTCAC CTCGCCTAGA AGGGCCCTCA ACCTTGAAAA TAAGAAGCAG
CACTATGAAA ACAAACTACC CATTTCTCAA CTGTTCAAAG ATTAGACCTT GTACCACCTC
CTTGCTGGCT CCCAAAGAGA cctcatctat aaatggaaat aataacacaa catgccttgt
tgtgtcttct ttcagggctg tagatatgaa ctaagataac atacacactt agcatact
K
cctggcacac agtaagcagt tgataaatat tacttagtac tGATATGATT TTTATTATTC
TAAGAATGAG TTGTAGTTAT TATTAAGAGA GTAATCTTTC TAAAATACAT ATTGTTCCAA
CCCAAGCCTA AAAGCTCCAC AGTCAATTTT CAGTTTTTCA TGCAAACACA AGGAACCAGT
ATGGCAAAAA TCCTAAAAAA TAGATACTCT ATAGGTTCTC ATTTGGATTT TGAGTACATT
A
There is no frequency submission for ss18339034.
No sufficient data to compute Hardy-weinberg probability for ss18339034.
There is no individual genotype data for ss18339034.
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