| Submitter | | Handle | SC_SNP | | Submitter SNP ID | SC-CHR6_NA11321-200402.chr1.NT_004668.16_1861233 | | RefSNP(rs#) | rs12172725 | | Submitted Batch ID | SC-CHR6_NA11321-200402 | | Submitted Date | Feb 20, 2004 | | Publication Cited | [1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases | | First entry to dbSNP | Feb 20 2004 12:00:00:000AM |
| | Resource Links | | GenBank Accession | NT_004668
| | Submitted Gene Name | N.D | | Submitted Gene ID | N.D. | | Submitted SNP Synonyms | N.D | | Submitted linkout | N.D |
| | Assay | | Species | Homo sapiens | Molecular
Type | Genomic | | Method | CHR6_NA11321 | | Ascertainment Samplesize | 2 | | Population | N.D. |
| | Allele | | Observed Allele | T/A | | Ancestral Allele | N.D. | | Allele Origin | N/A | | SNP Class | SNV | | CpG Code | Unknown |
| | | Variation | | Frequency Submission | N.D. | | Genotype Summary | N.D. | | Genotype Submission | N.D. | | Haplotype | N.D. |
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| Comment | | sequence position qualityS6A_3-86j04.p1k -355 56 |
>gnl|dbSNP|ss18339046|allelePos=216|len=716|taxid=9606|alleles='T/A'|mol=Genomic GTTATTGTTG CTCTTCTGAT TGTTTGGGGT AGGGTATCTC AGGTGTTTAT GATGTAATTA
AAAATAATAC ACTAAATATC CAGTTAACTA AATAAAAGTA GGCTGTGAAT GGATCAATGA
TGACAAAGTA TCATGAATGA GGGATTGTGA ATAATCTATT TTTATGAACC TGTGGTCAAA
TTAAAAATAA TAAATTGGGC tttttttttt ttttt
W
aatatacacg gggtctcact ctgtagccca ggctggagtg cagtggcatg atcatagctc
actgtaaccg cgaatccttg ggctcaagaa atcctttcac ctcagccttg agagtagcta
atactacagg catgcaccac catgcccagc taattttttt tttttttttt tgagacgggg
tctcgctttg tcacccaggc tggaatgaag tgccgcaatc acagctcact gtaaccgcga
atccttgggc tcaagaaatc ctttcacctc agccttgaga gtagctaata atacaggtat
gcaccaccat gcccagctAA tttttttttt ttttttgaga cagggtctct ctttgtcacc
caggctggaa tgaagtgccg caatcacagc tcactgcagc ctcaacgtcc tggattaaag
tgatcctcct gcctcaacct cccaagtagc tgggactaca ccctgctaat tttgtatttt
tttgtagaga tggggtttTG
There is no frequency submission for ss18339046.
No sufficient data to compute Hardy-weinberg probability for ss18339046.
There is no individual genotype data for ss18339046.
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