Submitter | Handle | SC_SNP | Submitter SNP ID | SC-CHR6_NA11321-200402.chr1.NT_004836.15_4224688 | RefSNP(rs#) | rs10733123 | Submitted Batch ID | SC-CHR6_NA11321-200402 | Submitted Date | Feb 20, 2004 | Publication Cited | [1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP [2] SSAHA: A Fast Search Method for Large DNA Databases | First entry to dbSNP | Feb 20 2004 12:00:00:000AM |
| Resource Links | GenBank Accession | NT_004836
| Submitted Gene Name | N.D | Submitted Gene ID | N.D. | Submitted SNP Synonyms | N.D | Submitted linkout | N.D |
| Assay | Species | Homo sapiens | Molecular Type | Genomic | Method | CHR6_NA11321 | Ascertainment Samplesize | 2 | Population | N.D. |
| Allele | Observed Allele | A/G | Ancestral Allele | N.D. | Allele Origin | N/A | SNP Class | SNV | CpG Code | c_g/a |
| | Variation | Frequency Submission | N.D. | Genotype Summary | N.D. | Genotype Submission | N.D. | Haplotype | N.D. |
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Comment | sequence position qualityS6A_3-71i17.p1k -343 56 |
>gnl|dbSNP|ss18339047|allelePos=331|len=818|taxid=9606|alleles='A/G'|mol=Genomic TTTATAGTAT TCGAGTCACA GGAGCGTGAC CTTTTCTGAT TTATTATAGA ATGAAGATGC
TGCACTTTAT TACTCTTTTA AATCCTTGTT TTTCGGATAA GCTTAAAAGC AGCACAATCA
TCAGAGCTAT AGCCATTGGA AGTCAGAAAA AAAATCAGAT AAAATTGAAA ATTTTATTTT
TATTGGGTAC TGTTTACCGC tttatctact tatttattta tttatttatt tatttattta
tttatttatt Attttgagac agagtttcac gctgttaccc aggctggagt gcaatggtac
gatctcggct cactgcaacc ttcgcctccc
R
ggatcaagtg attcttacgc ctcagcctcc cgagtaggtg ggattacagg tgggtgccat
catgcccagc taatttttgt atttttagta gagatgggat ttcactgtgc tggccaggct
agtcttgaac tcctgacttc aggtgatcca cccacctcag cctcccaaaa tgctgagatt
ataagcatga gccaccgtgc ctaaccTGAT TAGCACTTTA AGTGTTAATG GTTCATAAAT
TTCATGtaca ttaattaaat gtatacatat taattatatt gatttaatta caactatatt
atatatagtt atatatacat ttaattatat taAAAAACAT ACATTAAAGT GGTTAACTAT
AAAATAACAA AGTATGTGAA ATGTGAACTA TTCAAAATAA ATATAGTTTA AATGAAAGAA
TGTCTGCTAC ATTTAAATGA AAGACTCTTC CAACTTAAAA CACTGTGAAG CTGGTAATTC
AATAAAT
There is no frequency submission for ss18339047.
No sufficient data to compute Hardy-weinberg probability for ss18339047.
There is no individual genotype data for ss18339047.
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