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Submitted SNP(ss) Details: ss18339047           
Submitter
HandleSC_SNP
Submitter SNP IDSC-CHR6_NA11321-200402.chr1.NT_004836.15_4224688
RefSNP(rs#)rs10733123
Submitted Batch IDSC-CHR6_NA11321-200402
Submitted DateFeb 20, 2004
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 20 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR6_NA11321
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG Codec_g/a
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityS6A_3-71i17.p1k -343 56

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss18339047|allelePos=331|len=818|taxid=9606|alleles='A/G'|mol=Genomic
 TTTATAGTAT TCGAGTCACA GGAGCGTGAC CTTTTCTGAT TTATTATAGA ATGAAGATGC
 TGCACTTTAT TACTCTTTTA AATCCTTGTT TTTCGGATAA GCTTAAAAGC AGCACAATCA
 TCAGAGCTAT AGCCATTGGA AGTCAGAAAA AAAATCAGAT AAAATTGAAA ATTTTATTTT
 TATTGGGTAC TGTTTACCGC tttatctact tatttattta tttatttatt tatttattta
 tttatttatt Attttgagac agagtttcac gctgttaccc aggctggagt gcaatggtac
 gatctcggct cactgcaacc ttcgcctccc
 R
 ggatcaagtg attcttacgc ctcagcctcc cgagtaggtg ggattacagg tgggtgccat
 catgcccagc taatttttgt atttttagta gagatgggat ttcactgtgc tggccaggct
 agtcttgaac tcctgacttc aggtgatcca cccacctcag cctcccaaaa tgctgagatt
 ataagcatga gccaccgtgc ctaaccTGAT TAGCACTTTA AGTGTTAATG GTTCATAAAT
 TTCATGtaca ttaattaaat gtatacatat taattatatt gatttaatta caactatatt
 atatatagtt atatatacat ttaattatat taAAAAACAT ACATTAAAGT GGTTAACTAT
 AAAATAACAA AGTATGTGAA ATGTGAACTA TTCAAAATAA ATATAGTTTA AATGAAAGAA
 TGTCTGCTAC ATTTAAATGA AAGACTCTTC CAACTTAAAA CACTGTGAAG CTGGTAATTC
 AATAAAT

  Submitted Frequency for ss18339047 back to top
There is no frequency submission for ss18339047.


  dbSNP summary of Genotypes for ss18339047 back to top
No sufficient data to compute Hardy-weinberg probability for ss18339047.


  Submitted individual genotype for ss18339047 back to top
There is no individual genotype data for ss18339047.

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