Submitter | Handle | SC_SNP | Submitter SNP ID | SC-CHR6_NA11321-200402.chr1.NT_004668.16_3243665 | RefSNP(rs#) | rs3738196 | Submitted Batch ID | SC-CHR6_NA11321-200402 | Submitted Date | Feb 20, 2004 | Publication Cited | [1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP [2] SSAHA: A Fast Search Method for Large DNA Databases | First entry to dbSNP | Feb 20 2004 12:00:00:000AM |
| Resource Links | GenBank Accession | NT_004668
| Submitted Gene Name | N.D | Submitted Gene ID | N.D. | Submitted SNP Synonyms | N.D | Submitted linkout | N.D |
| Assay | Species | Homo sapiens | Molecular Type | Genomic | Method | CHR6_NA11321 | Ascertainment Samplesize | 2 | Population | N.D. |
| Allele | Observed Allele | T/G | Ancestral Allele | N.D. | Allele Origin | N/A | SNP Class | SNV | CpG Code | Unknown |
| | Variation | Frequency Submission | N.D. | Genotype Summary | population count: 1 | Genotype Submission | N.D. | Haplotype | N.D. |
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Comment | sequence position qualityS6A_3-58p22.q1k 730 27 |
>gnl|dbSNP|ss18339051|allelePos=369|len=707|taxid=9606|alleles='T/G'|mol=Genomic CCGATAGAAT GGTTCCAGCC AGCAAGAACA GTTGCCTTGT GCTGAGTGTA GCGGAAGAAG
ACAATAATTG ACAGAGAAGC ATATCATCTC TTTCTACCCA GTGTACCCAA TCCACTCTGC
CTCATCTCCC CACCATGGAC CTGGAATGTT GTCAACCTAC TTGTGTGAGA TAAGAAAACT
CTCATTAAGA AATCCATTCA tcacgcctgt aatcccagcc ctttgggagg ctgaggcagg
cagatcactt gaggccagta gttcaagccc agcctgggcg atatggtgaa atctgtttct
actaaaaata cagaaattaa ctgggtgtgg tggcacacgc ctgtaatccc ccagctactc
tagaggct
K
aggcatgaga attggttgaa cccaggaggc ggaggttgca gtgagctgag atcacaccac
tgcactccag cctgggcaac agggtgagac tctgtctcaa aaagaaaaaa aaaaaagagg
aaagaaGGAA AGAAGGAAGG CAGGCCAGCC ATTCAAATTG ATTCGAACAT CAGATTCTTT
GAACTTGCAC ATGTGATGTG GTTTGACTCC CTTATAAATA CATCGAATTT GGTGGCTTAA
AGCTTTAGAG TGGATCATGA AGAATCTCAC AGGGGTCAAA TGAGACTCTG GCCCCAAATT
ATGGATCTGT ACTTGGGGTA CATTTTCTTT CCTGGCCC
There is no frequency submission for ss18339051.
No sufficient data to compute Hardy-weinberg probability for ss18339051.
There is no individual genotype data for ss18339051.
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